RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 LYRM2Q9NU23 88 aaPredicted RBP7.43□□□□□ -1.22
PTPRE-207ENST00000471218 FKBP11Q9NYL4 201 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 BET1LQ9NYM9 111 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 PRR13Q9NZ81 148 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 CACNG5Q9UF02 275 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 PRNDQ9UKY0 176 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 RCL1Q9Y2P8 373 aaKnown RBP7.43□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF257Q9Y2Q1 563 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 U3KQ87 197 aa7.43□□□□□ -1.22
PTPRE-207ENST00000471218 KIAA2026Q5HYC2 2103 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 ODF3BA8MYP8 253 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 H0YJW9 148 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 TRIM77I1YAP6 450 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 SYNGR2O43760 224 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 RAMP3O60896 148 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 JTBO76095 146 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 LY6HO94772 140 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 SPDEFO95238 335 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 CT45A6P0DMU7 189 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 CT45A5P0DMU8 189 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 CT45A7P0DMV0 189 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 RPL12P30050 165 aaKnown RBP7.42□□□□□ -1.22
PTPRE-207ENST00000471218 SPCS3P61009 180 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 RPL23AP62750 156 aaKnown RBP7.42□□□□□ -1.22
PTPRE-207ENST00000471218 VAMP2P63027 116 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 RPP30P78346 268 aaKnown RBP7.42□□□□□ -1.22
PTPRE-207ENST00000471218 TNFRSF9Q07011 255 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 HABP2Q14520 560 aaPredicted RBP7.42□□□□□ -1.22
PTPRE-207ENST00000471218 RPL39P5Q59GN2 51 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF383Q8NA42 475 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 CLDND2Q8NHS1 167 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 RHOVQ96L33 236 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 NABP2Q9BQ15 211 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 LPAR2Q9HBW0 351 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 SLC35D1Q9NTN3 355 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 OR5AC2Q9NZP5 309 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 FOXA2Q9Y261 457 aaPredicted RBP7.42□□□□□ -1.22
PTPRE-207ENST00000471218 WASHC3Q9Y3C0 194 aa7.42□□□□□ -1.22
PTPRE-207ENST00000471218 TBL2Q9Y4P3 447 aaKnown RBP7.42□□□□□ -1.22
PTPRE-207ENST00000471218 LEUTXA8MZ59 168 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 INS-IGF2F8WCM5 200 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 LY6LH3BQJ8 138 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 BUB1B-PAK6H3BSN5 160 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 TSPAN9O75954 239 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 KRASP01116 189 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 IL6RP08887 468 aaPredicted RBP7.41□□□□□ -1.22
PTPRE-207ENST00000471218 HKR1P10072 659 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 TPT1P13693 172 aaKnown RBP7.41□□□□□ -1.22
PTPRE-207ENST00000471218 HTR1DP28221 377 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 GNG10P50151 68 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 IFITM2Q01629 132 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF266Q14584 549 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 IL17RELQ6ZVW7 336 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 STX12Q86Y82 276 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 MRPL41Q8IXM3 137 aaKnown RBP7.41□□□□□ -1.22
PTPRE-207ENST00000471218 OR2C3Q8N628 320 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 Q8N7P7 452 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 UBAC2Q8NBM4 344 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 ZNF680Q8NEM1 530 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 DMBX1Q8NFW5 382 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 OR4P4Q8NGL7 312 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 OR5B3Q8NH48 314 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 LHX4Q969G2 390 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 CLCC1Q96S66 551 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 SIRPDQ9H106 197 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 PLSCR3Q9NRY6 295 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 TMEM14BQ9NUH8 114 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 DPM3Q9P2X0 92 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 ONECUT1Q9UBC0 465 aa7.41□□□□□ -1.22
PTPRE-207ENST00000471218 BORCS7-ASMTA0A0B4J1R7 106 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 A0A0G2JRQ6 117 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 C15orf61A6NNL5 157 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 FAM157AC9JC47 383 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 DFFBO76075 338 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 CRYZL1O95825 349 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 CD1BP29016 333 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 G6PCP35575 357 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 UBE2E1P51965 193 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 UBE2KP61086 200 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 HBG1P69891 147 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 HBG2P69892 147 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 CXorf66Q5JRM2 361 aaPredicted RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 FAM53AQ6NSI3 398 aaPredicted RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 OR4A16Q8NH70 328 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 LEAP2Q969E1 77 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 RPEQ96AT9 228 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 FLYWCH2Q96CP2 140 aaKnown RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 GPHA2Q96T91 129 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 TSNAXQ99598 290 aaKnown RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 MRPL20Q9BYC9 149 aaKnown RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 PARD6GQ9BYG4 376 aaPredicted RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 TMEM140Q9NV12 185 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 UBQLN2Q9UHD9 624 aa7.4□□□□□ -1.22
PTPRE-207ENST00000471218 LSM5Q9Y4Y9 91 aaKnown RBP7.4□□□□□ -1.22
PTPRE-207ENST00000471218 MGAM2Q2M2H8 2515 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 TRAV20A0A0B4J274 112 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 MEX3AA1L020 520 aaKnown RBP7.39□□□□□ -1.23
PTPRE-207ENST00000471218 TMEM89A2RUT3 159 aa7.39□□□□□ -1.23
PTPRE-207ENST00000471218 CHST1O43916 411 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms