RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-218ENST00000470942 LYSMD2Q8IV50 215 aa12.11□□□□□ -0.47
HDAC6-218ENST00000470942 PUSL1Q8N0Z8 303 aaKnown RBP12.11□□□□□ -0.47
HDAC6-218ENST00000470942 OR6F1Q8NGZ6 308 aa12.11□□□□□ -0.47
HDAC6-218ENST00000470942 TMEM167AQ8TBQ9 72 aa12.11□□□□□ -0.47
HDAC6-218ENST00000470942 MOB3AQ96BX8 217 aa12.11□□□□□ -0.47
HDAC6-218ENST00000470942 AIFM2Q9BRQ8 373 aa12.11□□□□□ -0.47
HDAC6-218ENST00000470942 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-218ENST00000470942 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
HDAC6-218ENST00000470942 SAP30O75446 220 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 BRI3O95415 125 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 HPRT1P00492 218 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 MAS1LP35410 378 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 INSL3P51460 131 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 TSPAN5P62079 268 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 RNASE12Q5GAN4 147 aaKnown RBP12.1□□□□□ -0.47
HDAC6-218ENST00000470942 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
HDAC6-218ENST00000470942 FYTTD1Q96QD9 318 aaKnown RBP12.1□□□□□ -0.47
HDAC6-218ENST00000470942 HRASLSQ9HDD0 168 aa12.1□□□□□ -0.47
HDAC6-218ENST00000470942 DPPA5A6NC42 116 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 HMX3A6NHT5 357 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 RBFOX2O43251 390 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDAC6-218ENST00000470942 PRH1P02810 166 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 RCVRNP35243 200 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 RPL27AP46776 148 aaKnown RBP12.09□□□□□ -0.47
HDAC6-218ENST00000470942 OR4A47Q6IF82 309 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 USMG5Q96IX5 58 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 PRR25Q96S07 402 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 FXYD6Q9H0Q3 95 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 EXTL2Q9UBQ6 330 aa12.09□□□□□ -0.47
HDAC6-218ENST00000470942 PGLYRP1O75594 196 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-218ENST00000470942 LY86O95711 162 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 RLN1P04808 185 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 NQO2P16083 231 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 ZP3P21754 424 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 TAS2R31P59538 309 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 RPL8P62917 257 aaKnown RBP12.08□□□□□ -0.48
HDAC6-218ENST00000470942 SPCS2Q15005 226 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 SLC25A42Q86VD7 318 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 CMTM1Q8IZ96 169 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 DMBX1Q8NFW5 382 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 OR4A5Q8NH83 315 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 CD300LFQ8TDQ1 290 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 BET1LQ9NYM9 111 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 PEF1Q9UBV8 284 aaKnown RBP12.08□□□□□ -0.48
HDAC6-218ENST00000470942 ADAM30Q9UKF2 790 aa12.08□□□□□ -0.48
HDAC6-218ENST00000470942 E7EUB6 86 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 GPR31O00270 319 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 RGS5O15539 181 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 S1PR2O95136 353 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 IL6RP08887 468 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-218ENST00000470942 MYOD1P15172 320 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 RPA2P15927 270 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 HLA-GP17693 338 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 RHOGP84095 191 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 ELOVL1Q9BW60 279 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 AKIP1Q9NQ31 210 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-218ENST00000470942 SORL1Q92673 2214 aa12.07□□□□□ -0.48
HDAC6-218ENST00000470942 FAM223BA6NKX1 122 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 TEX22C9J3V5 150 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 M0QYG6 137 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 RBMXL2O75526 392 aaKnown RBP12.06□□□□□ -0.48
HDAC6-218ENST00000470942 OR2J3O76001 311 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 F2RP25116 425 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 S100GP29377 79 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 LPAR6P43657 344 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 ERVK-16P61578 105 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 ZNF45Q02386 682 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 DCTN2Q13561 401 aaKnown RBP12.06□□□□□ -0.48
HDAC6-218ENST00000470942 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 FAM223AQ8IWN6 122 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 OR52I2Q8NH67 350 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 RAB2BQ8WUD1 216 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 SLC2A9Q9NRM0 540 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 TMEM140Q9NV12 185 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 KLK11Q9UBX7 282 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 ZNF257Q9Y2Q1 563 aa12.06□□□□□ -0.48
HDAC6-218ENST00000470942 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 TRAV3A0A0B4J244 114 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 UPK2O00526 184 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 CTDSP2O14595 271 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 NOL3O60936 208 aaKnown RBP12.05□□□□□ -0.48
HDAC6-218ENST00000470942 IFNA6P05013 189 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 ZNF735P0CB33 412 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 TMBIM6P55061 237 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 EXOSC2Q13868 293 aaKnown RBP12.05□□□□□ -0.48
HDAC6-218ENST00000470942 POU2AF1Q16633 256 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 C19orf35Q6ZS72 473 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 C15orf40Q8WUR7 153 aa12.05□□□□□ -0.48
HDAC6-218ENST00000470942 DGCR14Q96DF8 476 aaKnown RBP12.05□□□□□ -0.48
HDAC6-218ENST00000470942 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms