RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 TMEM109Q9BVC6 243 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 MRPS26Q9BYN8 205 aaKnown RBP2.25□□□□□ -2.05
PRPF3-204ENST00000470824 WDR54Q9H977 334 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 RDH14Q9HBH5 336 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 SLC2A9Q9NRM0 540 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 GLTPQ9NZD2 209 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 RSL24D1Q9UHA3 163 aaKnown RBP2.25□□□□□ -2.05
PRPF3-204ENST00000470824 SMPXQ9UHP9 88 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 DKKL1Q9UK85 242 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 OR52A1Q9UKL2 312 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 RPL26L1Q9UNX3 145 aaKnown RBP2.25□□□□□ -2.05
PRPF3-204ENST00000470824 ARL5AQ9Y689 179 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 TSC2P49815 1807 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 MUC22E2RYF6 1773 aaPredicted RBP2.25□□□□□ -2.05
PRPF3-204ENST00000470824 CELSR3Q9NYQ7 3312 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 TRIP11Q15643 1979 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 HELZP42694 1942 aaKnown RBP2.25□□□□□ -2.05
PRPF3-204ENST00000470824 TCHHQ07283 1943 aa2.25□□□□□ -2.05
PRPF3-204ENST00000470824 COL1A2P08123 1366 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SPENQ96T58 3664 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SPAG17Q6Q759 2223 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 C9orf170A2RU37 121 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 DISC1C4P0D8 188 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 C9J4A7 227 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 CDIPTO14735 213 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SLC16A4O15374 487 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 RGS5O15539 181 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 COX7A2P2O60397 106 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 BRI3O95415 125 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 CXorf1O96002 111 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 NRASP01111 189 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 HRASP01112 189 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 KRASP01116 189 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 IGLV3-19P01714 112 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 IGHV1-46P01743 117 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TCRBP04435 133 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 KCNE1P15382 129 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 ZNF25P17030 456 aaPredicted RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SPI1P17947 270 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 RPA3P35244 121 aaPredicted RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TGFBR1P36897 503 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 RPL5P46777 297 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 GABRA4P48169 554 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TTPAP49638 278 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 OR4D2P58180 307 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 LSM6P62312 80 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 MEF2CQ06413 473 aaPredicted RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SRSF6Q13247 344 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 HTR4Q13639 388 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 CDK10Q15131 360 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SSX1Q16384 188 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SLC36A2Q495M3 483 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 HSD17B12Q53GQ0 312 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 UBE2NLQ5JXB2 153 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 RBM48Q5RL73 367 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 C9orf64Q5T6V5 341 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TBPL2Q6SJ96 375 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SPNS3Q6ZMD2 512 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 FA2HQ7L5A8 372 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TMEM144Q7Z5S9 345 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 DAZ4Q86SG3 579 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 LYG2Q86SG7 212 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 C10orf107Q8IVU9 208 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 SPICQ8N5J4 248 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TMEM156Q8N614 296 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 ZNF283Q8N7M2 679 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TMEM161BQ8NDZ6 487 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 ZNF555Q8NEP9 628 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 OR1M1Q8NGA1 313 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 OR4K17Q8NGC6 315 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 OR2Y1Q8NGV0 311 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 PRAP1Q96NZ9 151 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 OR2V2Q96R30 315 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 PHB2Q99623 299 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 VPS25Q9BRG1 176 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 THTPAQ9BU02 230 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 ZNF426Q9BUY5 554 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 GGACTQ9BVM4 153 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 DAZ1Q9NQZ3 744 aaKnown RBP2.24□□□□□ -2.05
PRPF3-204ENST00000470824 C1orf109Q9NX04 203 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 BABAM2Q9NXR7 383 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 MAT2BQ9NZL9 334 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 TAC3Q9UHF0 121 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 BAIAP2Q9UQB8 552 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 ZNF337Q9Y3M9 751 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 OR51B4Q9Y5P0 310 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 ZNF780BQ9Y6R6 833 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 USP24Q9UPU5 2620 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 DENND4CQ5VZ89 1909 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 NBEAQ8NFP9 2946 aa2.24□□□□□ -2.05
PRPF3-204ENST00000470824 THADAQ6YHU6 1953 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 FREM2Q5SZK8 3169 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 PTPRDP23468 1912 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 A0A1B0GTI1 187 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 RBFOX3A6NFN3 312 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 CD300LBA8K4G0 201 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 CLDN34H7C241 214 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 I3L4J1 428 aa2.23□□□□□ -2.05
PRPF3-204ENST00000470824 K7EP13 123 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms