RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 RNF2Q99496 336 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 ZNF430Q9H8G1 570 aaPredicted RBP6.67□□□□□ -1.34
TPM3-215ENST00000469717 SLC45A2Q9UMX9 530 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 EPG5Q9HCE0 2579 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 A0A096LPE4 126 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 TRAV24A0A0B4J272 114 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 A0A1W2PPZ6 126 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 RBMXL2O75526 392 aaKnown RBP6.67□□□□□ -1.34
TPM3-215ENST00000469717 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 ARL14EPLP0DKL9 152 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 COX5AP20674 150 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 RELBQ01201 579 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 FXYD3Q14802 87 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 WFDC12Q8WWY7 111 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 TNCP24821 2201 aa6.67□□□□□ -1.34
TPM3-215ENST00000469717 OR6C6A6NF89 314 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 RHBDL1O75783 438 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 CCL3P10147 92 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 SLC25A6P12236 298 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 RAC3P60763 192 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 RPL30P62888 115 aaKnown RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 PAFAH1B2P68402 229 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 OR2M7Q8NG81 312 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 OR5A2Q8NGI9 324 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 OR10G8Q8NGN5 311 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 LOXL4Q96JB6 756 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 SMG1Q96Q15 3661 aaKnown RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 KIR2DS1A0A191URI9 304 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 NGFP01138 241 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 CYC1P08574 325 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 KIR2DS4P43632 304 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 ZNF83P51522 516 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 FOXG1P55316 489 aaPredicted RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 FGF12P61328 243 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 UBE2V1Q13404 147 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 KIR2DS1Q14954 304 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 DRAM1Q8N682 238 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 Q8N7P7 452 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 OR2H1Q9GZK4 316 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 TMEM38BQ9NVV0 291 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 CHCHD2Q9Y6H1 151 aaPredicted RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 HCFC1P51610 2035 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 NCKAP5O14513 1909 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 ODAMA1E959 279 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 TFF1P04155 84 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 KLF3P57682 345 aaPredicted RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 SELENOVP59797 346 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 RANP62826 216 aaKnown RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 ATP6V1FQ16864 119 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 ACSF3Q4G176 576 aaPredicted RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 LDLRAD2Q5SZI1 272 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 OR4B1Q8NGF8 309 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 YTHDF2Q9Y5A9 579 aaKnown RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 COX11Q9Y6N1 276 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 A0A1W2PS18 150 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 K7EP13 123 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 P04436 131 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 CA6P23280 308 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 SCGB2A2Q13296 93 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 SPATA31B1PQ5VZV4 182 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 YRDCQ86U90 279 aaKnown RBP6.66□□□□□ -1.34
TPM3-215ENST00000469717 C5orf30Q96GV9 206 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 ZNF586Q9NXT0 402 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 UQCR10Q9UDW1 63 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 NAT8BQ9UHF3 227 aa6.66□□□□□ -1.34
TPM3-215ENST00000469717 S1PR2O95136 353 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 MT-CO3P00414 261 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 TSPOP30536 169 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 MRPL54Q6P161 138 aaKnown RBP6.65□□□□□ -1.34
TPM3-215ENST00000469717 VWA1Q6PCB0 445 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
TPM3-215ENST00000469717 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 OR10P1Q8NGE3 313 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 RNF138Q8WVD3 245 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 PLPPR2Q96GM1 343 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 GMPPAQ96IJ6 420 aaPredicted RBP6.65□□□□□ -1.34
TPM3-215ENST00000469717 TMEM147Q9BVK8 224 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 GP6Q9HCN6 339 aa6.65□□□□□ -1.34
TPM3-215ENST00000469717 TRAPPC2LH3BP13 241 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 TMPRSS2O15393 492 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 ZIC3O60481 467 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 CA1P00915 261 aaPredicted RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 FBLN7Q53RD9 439 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 NIT1Q86X76 327 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 DOLPP1Q86YN1 238 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 ZNF596Q8TC21 504 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 LSM10Q969L4 123 aaKnown RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 FOXB1Q99853 325 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 QTRT1Q9BXR0 403 aaKnown RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 RNASE7Q9H1E1 156 aaKnown RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 A0A0G2JMM0 328 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 A0A1W2PPB8 328 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 A0A1W2PRS3 328 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 ZNF503-AS2A6NEH8 195 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 KIR3DP1A8MWS1 328 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 S100GP29377 79 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 SRIP30626 198 aa6.65□□□□□ -1.35
TPM3-215ENST00000469717 CEBPDP49716 269 aaPredicted RBP6.65□□□□□ -1.35
TPM3-215ENST00000469717 RPL31P62899 125 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms