RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LINC00311Q8N616 119 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 ZBTB8BQ8NAP8 495 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-208ENST00000469585 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-208ENST00000469585 OR4X2Q8NGF9 303 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 OR4P4Q8NGL7 312 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 OR13F1Q8NGS4 319 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 OR56B4Q8NH76 319 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 OR1L1Q8NH94 360 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 LEAP2Q969E1 77 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 SLC25A46Q96AG3 418 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 YIPF6Q96EC8 236 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 ADTRPQ96IZ2 230 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 C1orf147Q96MC9 270 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-208ENST00000469585 Q9N2K0 584 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 NECAP2Q9NVZ3 263 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 COMMD3Q9UBI1 195 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 MRPS7Q9Y2R9 242 aaKnown RBP4.95□□□□□ -1.62
PTCD3-208ENST00000469585 PRELID3BQ9Y3B1 194 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 MMP24Q9Y5R2 645 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 ZANQ9Y493 2812 aa4.95□□□□□ -1.62
PTCD3-208ENST00000469585 IGHV1-3A0A0C4DH29 117 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 OR5H14A6NHG9 310 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 C15orf65H3BRN8 121 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 LANCL1O43813 399 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 RBBP9O75884 186 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 NAPSAO96009 420 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 IGKV1D-33P01593 117 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 IGKV1-33P01594 117 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 IGLV1-47P01700 117 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 IGLV2-11P01706 119 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 APOA1P02647 267 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 OPN1MWP04001 364 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 OPN1MW2P0DN77 364 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 OPN1MW3P0DN78 364 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 OR5H8P0DN80 308 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 CD37P11049 281 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 CD1BP29016 333 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 PRSS3P35030 304 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 RCVRNP35243 200 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 REG1BP48304 166 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 INPP1P49441 399 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 LUMP51884 338 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-208ENST00000469585 ACTBP60709 375 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 TSPAN5P62079 268 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 QRFPP83859 136 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 MMDQ15546 238 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 LY6G6FQ5SQ64 297 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 HCP5Q6MZN7 132 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 CNIH2Q6PI25 160 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 TCF23Q7RTU1 214 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 CENPVQ7Z7K6 275 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-208ENST00000469585 LYPD6Q86Y78 171 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 GAPTQ8N292 157 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 C11orf42Q8N5U0 333 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 DRAM1Q8N682 238 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 OR5M8Q8NGP6 311 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 UBALD1Q8TB05 177 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 RTN4IP1Q8WWV3 396 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-208ENST00000469585 SGK494Q96LW2 274 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 RBM14Q96PK6 669 aaKnown RBP4.94□□□□□ -1.62
PTCD3-208ENST00000469585 TSNAXQ99598 290 aaKnown RBP4.94□□□□□ -1.62
PTCD3-208ENST00000469585 DCUN1D5Q9BTE7 237 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 KRTAP1-5Q9BYS1 174 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 ESM1Q9NQ30 184 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 RNF150Q9ULK6 438 aa4.94□□□□□ -1.62
PTCD3-208ENST00000469585 AKAP9Q99996 3911 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 KIAA2026Q5HYC2 2103 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 A0A0B4J203 849 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 A0A1W2PPE3 182 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 TMEM235A6NFC5 223 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 MFNGO00587 321 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 ITGB1BP1O14713 200 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 FGF16O43320 207 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 MMP23AO75900 390 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 GABARAPO95166 117 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 CGB3P0DN86 165 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 CGB7P0DN87 165 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 VDAC1P21796 283 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 NCS1P62166 190 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 MRPS10P82664 201 aaKnown RBP4.93□□□□□ -1.62
PTCD3-208ENST00000469585 CATR1Q13166 79 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 ABCA11PQ4W5N1 156 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 ACTBL2Q562R1 376 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 LPCAT3Q6P1A2 487 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 NR2C2APQ86WQ0 139 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 CMTM1Q8IZ96 169 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 BEST4Q8NFU0 473 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 OR5H2Q8NGV7 314 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 CHPT1Q8WUD6 406 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 C6orf62Q9GZU0 229 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-208ENST00000469585 OR2D2Q9H210 308 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 ABCG5Q9H222 651 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 C16orf95Q9H693 158 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 RDH8Q9NYR8 311 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 PTTG2Q9NZH5 202 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 NDUFA13Q9P0J0 144 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 WASHC3Q9Y3C0 194 aa4.93□□□□□ -1.62
PTCD3-208ENST00000469585 A0A0A6YYD4 124 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 A6NDX4 124 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 TRIM64CA6NLI5 447 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms