RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 ZNF436Q9C0F3 470 aaPredicted RBP4.2□□□□□ -1.74
ITGA6-208ENST00000469534 ALX4Q9H161 411 aaPredicted RBP4.2□□□□□ -1.74
ITGA6-208ENST00000469534 RANBP3Q9H6Z4 567 aaPredicted RBP4.2□□□□□ -1.74
ITGA6-208ENST00000469534 DPM3Q9P2X0 92 aa4.2□□□□□ -1.74
ITGA6-208ENST00000469534 RCL1Q9Y2P8 373 aaKnown RBP4.2□□□□□ -1.74
ITGA6-208ENST00000469534 PRELID3BQ9Y3B1 194 aa4.2□□□□□ -1.74
ITGA6-208ENST00000469534 MYO9AB2RTY4 2548 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 FXYD6-FXYD2A0A087WZ82 144 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 TRAV14DV4A0A0A6YYC5 116 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 A0A0B4J2A0 478 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 LY6LH3BQJ8 138 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 VENTXO95231 258 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 CDS2O95674 445 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 LY6G6DO95868 133 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 HNRNPCP07910 306 aaKnown RBP eCLIP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 SAA1P0DJI8 122 aaPredicted RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 TMEM11P17152 192 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 F2RL1P55085 397 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 ERVK-16P61578 105 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 POLR2GP62487 172 aaKnown RBP eCLIP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 PJVKQ0ZLH3 352 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 RAB32Q13637 225 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 PLGLAQ15195 96 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 DEFB112Q30KQ8 113 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 CXorf66Q5JRM2 361 aaPredicted RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 C10orf55Q5SWW7 151 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 THOC7Q6I9Y2 204 aaKnown RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 OR4A47Q6IF82 309 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 CLEC9AQ6UXN8 241 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 H2BFWTQ7Z2G1 175 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 ZBTB8BQ8NAP8 495 aaPredicted RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 OR2T35Q8NGX2 323 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 OR4S2Q8NH73 311 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 CFHR4Q92496 578 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 TAF15Q92804 592 aaKnown RBP eCLIP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 RRNAD1Q96FB5 475 aaKnown RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 C1orf159Q96HA4 380 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 ADTRPQ96IZ2 230 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 C2orf50Q96LR7 162 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 QTRT1Q9BXR0 403 aaKnown RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 MS4A7Q9GZW8 240 aaPredicted RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 FBXL15Q9H469 300 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 TMEM140Q9NV12 185 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 SHPKQ9UHJ6 478 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 PAIP2BQ9ULR5 123 aaKnown RBP4.19□□□□□ -1.74
ITGA6-208ENST00000469534 WASHC3Q9Y3C0 194 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 FAM96BQ9Y3D0 163 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 ITPR3Q14573 2671 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 TACC2O95359 2948 aa4.19□□□□□ -1.74
ITGA6-208ENST00000469534 BAHCC1Q9P281 2608 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MARCH11A6NNE9 402 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 NCBP2LA6PVI3 153 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 G3V3Q6 166 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 H0YIZ8 118 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 H3BP45 60 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 H3BUX3 64 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 K7EPK0 472 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 WRBO00258 174 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 SSSCA1O60232 199 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 HPRT1P00492 218 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 IGLV2-23P01705 113 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MBPP02686 304 aaPredicted RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 GIPP09681 153 aaPredicted RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 SRP14P37108 136 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 CEACAM3P40198 252 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 KIR2DS2P43631 304 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 EIF2B2P49770 351 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 ZNF137PP52743 207 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 AP2S1P53680 142 aaPredicted RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 SRSF2Q01130 221 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 SMCO1Q147U7 214 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MMDQ15546 238 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MSMO1Q15800 293 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 TNXAQ16473 311 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MIDNQ504T8 468 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 NMSQ5H8A3 153 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 C9orf152Q5JTZ5 239 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MINOS1Q5TGZ0 78 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 C19orf35Q6ZS72 473 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 C1orf122Q6ZSJ8 110 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 FAM71E2Q8N5Q1 922 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 C8orf31Q8N9H6 132 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 OR11H4Q8NGC9 324 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 OR5AN1Q8NGI8 311 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 OR4A16Q8NH70 328 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 ABHD5Q8WTS1 349 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 FLYWCH2Q96CP2 140 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 BSCL2Q96G97 398 aaPredicted RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 TMEM56Q96MV1 263 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 ZNF48Q96MX3 618 aaPredicted RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 SSX3Q99909 188 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 RBKSQ9H477 322 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 UNKLQ9H9P5 680 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 RAB18Q9NP72 206 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 OR5AC2Q9NZP5 309 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 COMMD9Q9P000 198 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 MBD2Q9UBB5 411 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 METTL1Q9UBP6 276 aaKnown RBP4.18□□□□□ -1.74
ITGA6-208ENST00000469534 GAB2Q9UQC2 676 aa4.18□□□□□ -1.74
ITGA6-208ENST00000469534 TBL2Q9Y4P3 447 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms