RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM167AQ8TBQ9 72 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 PPP1R14BQ96C90 147 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 RITA1Q96K30 269 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 TSNAXQ99598 290 aaKnown RBP6.52□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM14BQ9NUH8 114 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 SVEP1Q4LDE5 3571 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 A0A1W2PRD5 423 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 A0A1W2PRF3 423 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 A0A1W2PRM7 423 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 CYSRT1A8MQ03 144 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 UPK2O00526 184 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 CCSO14618 274 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 SMAD7O15105 426 aaKnown RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 SIX6O95475 246 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 KRASP01116 189 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 OR9G9P0C7N8 305 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 G6PCP35575 357 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 SSBP2P81877 361 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 SMCO1Q147U7 214 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 PSG5Q15238 335 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 IAH1Q2TAA2 248 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 FAM120AOSQ5T036 256 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 AKAP14Q86UN6 197 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 VSTM2AQ8TAG5 236 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 RRNAD1Q96FB5 475 aaKnown RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 HARBI1Q96MB7 349 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 RANGRFQ9HD47 186 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM140Q9NV12 185 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 HSPB7Q9UBY9 170 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 ITGB1BP2Q9UKP3 347 aa6.51□□□□□ -1.37
NPHP3-204ENST00000469232 FOXA2Q9Y261 457 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-204ENST00000469232 IGHV3-72A0A0B4J1Y9 119 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 A6NDX4 124 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 H7C2Y5 167 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 RRHO14718 337 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 SHOXO15266 292 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 CCNKO75909 580 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 KBTBD11O94819 623 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 LY6G6DO95868 133 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 SNRNP70P08621 437 aaKnown RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 SAA1P0DJI8 122 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 AKR1C2P52895 323 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 ERVK-16P61578 105 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 LRRC75BQ2VPJ9 315 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 Q6ZS46 218 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 H2BFWTQ7Z2G1 175 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 FAM71E2Q8N5Q1 922 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 UXS1Q8NBZ7 420 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 ZNF48Q96MX3 618 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 RNF126Q9BV68 326 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 RANBP3Q9H6Z4 567 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 ZFP57Q9NU63 452 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 CACNG5Q9UF02 275 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 ZNF257Q9Y2Q1 563 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 SIGLEC9Q9Y336 463 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 SOX21Q9Y651 276 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 TNCP24821 2201 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 IGHV3OR16-10A0A075B7F0 116 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 TRAV14DV4A0A0A6YYC5 116 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 TRAV3A0A0B4J244 114 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 H0YIZ8 118 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 FGF16O43320 207 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 IGKV1D-33P01593 117 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 IGKV1-33P01594 117 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 MBPP02686 304 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 C1QBP02746 253 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 FAM106CPP0CH98 169 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 SLC25A4P12235 298 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 CD99P14209 185 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 PAX6P26367 422 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 MAS1LP35410 378 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 RPS16P62249 146 aaKnown RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 CD300CQ08708 224 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 PRSS8Q16651 343 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 DEFB112Q30KQ8 113 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 VMA21Q3ZAQ7 101 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM65Q6PI78 240 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 Q6YL49 198 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 C16orf82Q7Z2V1 217 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 VKORC1L1Q8N0U8 176 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM86BQ8N661 226 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 PPP1R1CQ8WVI7 109 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 RBM14Q96PK6 669 aaKnown RBP6.5□□□□□ -1.37
NPHP3-204ENST00000469232 PRNDQ9UKY0 176 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 TCF19Q9Y242 345 aa6.5□□□□□ -1.37
NPHP3-204ENST00000469232 NSD1Q96L73 2696 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-204ENST00000469232 C5orf51A6NDU8 294 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 NBR2O15453 112 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 OR2F2O95006 317 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 MPC2O95563 127 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 LY86O95711 162 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 HLA-DRB1P01911 266 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms