RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 MEIS3P1A6NDR6 274 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 A6NJ64 397 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 TEX22C9J3V5 150 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 HRASP01112 189 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 GTSCR1Q86UQ5 136 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 TMEM167AQ8TBQ9 72 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 SLC5A7Q9GZV3 580 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 AUNIPQ9H7T9 357 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 ZNF257Q9Y2Q1 563 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 PPP5D1E7EU14 171 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 PPYP01298 95 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 TGFBR1P36897 503 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 KIR2DS2P43631 304 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 BRWD1-AS2P59051 145 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 SPAG16Q8N0X2 631 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 PUSL1Q8N0Z8 303 aaKnown RBP16.57■□□□□ 0.24
TTC28-204ENST00000468807 Q8N402 240 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 MUC7Q8TAX7 377 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 IFT46Q9NQC8 304 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 FBXL7Q9UJT9 491 aa16.57■□□□□ 0.24
TTC28-204ENST00000468807 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.56■□□□□ 0.24
TTC28-204ENST00000468807 SULT1C2O00338 296 aa16.56■□□□□ 0.24
TTC28-204ENST00000468807 IGHV3-23P01764 117 aa16.56■□□□□ 0.24
TTC28-204ENST00000468807 IL6RP08887 468 aaPredicted RBP16.56■□□□□ 0.24
TTC28-204ENST00000468807 MAS1LP35410 378 aa16.56■□□□□ 0.24
TTC28-204ENST00000468807 HRASLSQ9HDD0 168 aa16.56■□□□□ 0.24
TTC28-204ENST00000468807 IZUMO1RA6ND01 250 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 E7EUB6 86 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 AIREO43918 545 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 HLA-AP01891 365 aaKnown RBP16.55■□□□□ 0.24
TTC28-204ENST00000468807 MYOD1P15172 320 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 AREGP15514 252 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 CBX5P45973 191 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 RPL8P62917 257 aaKnown RBP16.55■□□□□ 0.24
TTC28-204ENST00000468807 TIMM50Q3ZCQ8 353 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 TMEM17Q86X19 198 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 DYNLRB2Q8TF09 96 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 TUBA4BQ9H853 241 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 SLC2A9Q9NRM0 540 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 C19orf73Q9NVV2 129 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 SIGLEC8Q9NYZ4 499 aa16.55■□□□□ 0.24
TTC28-204ENST00000468807 NPIPB5A8MRT5 1133 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 DHFRP00374 187 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 REG1AP05451 166 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 ZNF735P0CB33 412 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 LSM3P62310 102 aaKnown RBP16.54■□□□□ 0.24
TTC28-204ENST00000468807 CATR1Q13166 79 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 OR4A47Q6IF82 309 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 ZBTB34Q8NCN2 500 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 OR5AP2Q8NGF4 316 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 S100A16Q96FQ6 103 aaKnown RBP16.54■□□□□ 0.24
TTC28-204ENST00000468807 TM2D3Q9BRN9 247 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 AIFM2Q9BRQ8 373 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 S4R3C0 116 aa16.54■□□□□ 0.24
TTC28-204ENST00000468807 DYNC2H1Q8NCM8 4307 aaKnown RBP16.53■□□□□ 0.24
TTC28-204ENST00000468807 A0A1B0GW64 132 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 A8MZ25 164 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 DEFA4P12838 97 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 HLA-GP17693 338 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 PSMB6P28072 239 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 HERV-K104P61576 105 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 MSMO1Q15800 293 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 OR51H1Q8NH63 302 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 KCTD12Q96CX2 325 aaKnown RBP16.53■□□□□ 0.24
TTC28-204ENST00000468807 PALMDQ9NP74 551 aa16.53■□□□□ 0.24
TTC28-204ENST00000468807 GGCTO75223 188 aaKnown RBP16.52■□□□□ 0.24
TTC28-204ENST00000468807 NDUFB8O95169 186 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 OR2C1O95371 312 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 CD300EQ496F6 205 aaPredicted RBP16.52■□□□□ 0.24
TTC28-204ENST00000468807 FAM209BQ5JX69 171 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 UBE2NLQ5JXB2 153 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 AADACL3Q5VUY0 350 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 ZNF818PQ6ZRF7 136 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 CROCCP3Q8IVE0 287 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 OR4A5Q8NH83 315 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 VCX3AQ9NNX9 186 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 BET1LQ9NYM9 111 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 EHFQ9NZC4 300 aa16.52■□□□□ 0.24
TTC28-204ENST00000468807 XRCC3O43542 346 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 TMEM127O75204 238 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 LYL1P12980 280 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 ARL3P36405 182 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 TAS2R31P59538 309 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 CD81P60033 236 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 TMEM69Q5SWH9 247 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 CASC10Q5T4H9 136 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 CLEC19AQ6UXS0 136 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 SAMD12Q8N8I0 201 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 OR2K2Q8NGT1 345 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 GIMAP1Q8WWP7 306 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 EEF1AKMT3Q96AZ1 226 aa16.51■□□□□ 0.23
TTC28-204ENST00000468807 THAP7Q9BT49 309 aaPredicted RBP16.51■□□□□ 0.23
TTC28-204ENST00000468807 RBFOX2O43251 390 aaKnown RBP eCLIP16.5■□□□□ 0.23
TTC28-204ENST00000468807 HPRT1P00492 218 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 CRYGCP07315 174 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 RPA2P15927 270 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 NQO2P16083 231 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 CTRB1P17538 263 aa16.5■□□□□ 0.23
TTC28-204ENST00000468807 EDN2P20800 178 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms