RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 SPIN2AQ99865 258 aa11.55□□□□□ -0.56
TMEM39A-205ENST00000468676 SPIN2BQ9BPZ2 258 aa11.55□□□□□ -0.56
TMEM39A-205ENST00000468676 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-205ENST00000468676 SLA2Q9H6Q3 261 aa11.55□□□□□ -0.56
TMEM39A-205ENST00000468676 ZNF430Q9H8G1 570 aaPredicted RBP11.55□□□□□ -0.56
TMEM39A-205ENST00000468676 VSIG4Q9Y279 399 aa11.55□□□□□ -0.56
TMEM39A-205ENST00000468676 DISC1C4P0D8 188 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 FGF2P09038 288 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 PGAM2P15259 253 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 ECI1P42126 302 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 ERVK-16P61578 105 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 PHLDA2Q53GA4 152 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 LCNL1Q6ZST4 164 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 C8orf86Q6ZUL3 223 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 ZNF491Q8N8L2 437 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 ZFAND1Q8TCF1 268 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 SRSF12Q8WXF0 261 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 PHB2Q99623 299 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 KLK15Q9H2R5 256 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 CMYA5Q8N3K9 4069 aa11.54□□□□□ -0.56
TMEM39A-205ENST00000468676 MSGN1A6NI15 193 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 SOX15O60248 233 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 BRI3O95415 125 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 CD33P20138 364 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 RND3P61587 244 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 RUNX1Q01196 453 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 CADM3Q8N126 398 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 OR4D10Q8NGI6 311 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 KRTAP3-2Q9BYR7 98 aa11.53□□□□□ -0.56
TMEM39A-205ENST00000468676 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 CCL24O00175 119 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 MPPED1O15442 326 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 S1PR2O95136 353 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 LPAR6P43657 344 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 AP3S2P59780 193 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 RPL8P62917 257 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 KIAA0141Q14154 515 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 SCGB2B2Q4G0G5 96 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 PYDC2Q56P42 97 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 C18orf65Q6ZTR6 163 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 TBC1D26Q86UD7 250 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 SLC25A42Q86VD7 318 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 P2RX4Q99571 388 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 PRRT1Q99946 306 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 THAP7Q9BT49 309 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 HRASLSQ9HDD0 168 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
TMEM39A-205ENST00000468676 A0A0G2JLM5 398 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 DPPA5A6NC42 116 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 DUS4LO95620 317 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 ZNF735P0CB33 412 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 HLA-GP17693 338 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 ETV6P41212 452 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 RPL27AP46776 148 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 SURF2Q15527 256 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 ETV3LQ6ZN32 361 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 MRPL41Q8IXM3 137 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 Q8N402 240 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 LINC00482Q8N8I6 264 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 CCDC71LQ8N9Z2 235 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 DEDD2Q8WXF8 326 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 RCC1LQ96I51 464 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 ZNF355PQ9NSJ1 428 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 SCP2D1Q9UJQ7 156 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 V9GYH0 126 aa11.51□□□□□ -0.57
TMEM39A-205ENST00000468676 MARCH11A6NNE9 402 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 I3L521 148 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 UPK2O00526 184 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 B3GALNT1O75752 331 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 TRGV3P03979 118 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 SERPINE2P07093 398 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 OR9G9P0C7N8 305 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 RPA2P15927 270 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 PIGPP57054 158 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 TPPP2P59282 170 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 ZNF585BQ52M93 769 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 OR4C16Q8NGL9 310 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 MS4A10Q96PG2 267 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 GPR61Q9BZJ8 451 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 TMEM140Q9NV12 185 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 SLC2A8Q9NY64 477 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 COA4Q9NYJ1 87 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 COPZ2Q9P299 210 aa11.5□□□□□ -0.57
TMEM39A-205ENST00000468676 SNAPC5O75971 98 aa11.49□□□□□ -0.57
TMEM39A-205ENST00000468676 KRASP01116 189 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms