RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 FBXL7Q9UJT9 491 aa15.91■□□□□ 0.14
COL9A3-207ENST00000467819 C2orf70A6NJV1 201 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 NOTOA8MTQ0 251 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 GGCTO75223 188 aaKnown RBP15.9■□□□□ 0.14
COL9A3-207ENST00000467819 KBTBD11O94819 623 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 IL6RP08887 468 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-207ENST00000467819 GNG2P59768 71 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 DEFB114Q30KQ6 69 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 LINC00322Q6ZN03 302 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-207ENST00000467819 VSTM2AQ8TAG5 236 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 GPHA2Q96T91 129 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 HSD17B10Q99714 261 aaKnown RBP15.9■□□□□ 0.14
COL9A3-207ENST00000467819 TXNL4BQ9NX01 149 aaKnown RBP15.9■□□□□ 0.14
COL9A3-207ENST00000467819 TAS2R8Q9NYW2 309 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 DAPK2Q9UIK4 370 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 DMRT1Q9Y5R6 373 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 SELENOKQ9Y6D0 94 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 S4R3C0 116 aa15.9■□□□□ 0.14
COL9A3-207ENST00000467819 E7EUB6 86 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 SSX5O60225 188 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 OR2C1O95371 312 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 FOLR2P14207 255 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 PSMB9P28065 219 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 FAM209BQ5JX69 171 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 SSX9Q7RTT3 188 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 PUSL1Q8N0Z8 303 aaKnown RBP15.89■□□□□ 0.13
COL9A3-207ENST00000467819 TMEM167AQ8TBQ9 72 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 SRD5A3Q9H8P0 318 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 ANXA10Q9UJ72 324 aa15.89■□□□□ 0.13
COL9A3-207ENST00000467819 A0A1B0GW64 132 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 RBMY1BA6NDE4 496 aaKnown RBP15.88■□□□□ 0.13
COL9A3-207ENST00000467819 RBMY1EA6NEQ0 496 aaKnown RBP15.88■□□□□ 0.13
COL9A3-207ENST00000467819 NPIPB5A8MRT5 1133 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 NDUFB8O95169 186 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 RBMY1DP0C7P1 496 aaKnown RBP15.88■□□□□ 0.13
COL9A3-207ENST00000467819 EIF4EBP1Q13541 118 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-207ENST00000467819 MFSD4AQ8N468 514 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 LGALS14Q8TCE9 139 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 CACNG8Q8WXS5 425 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 WDR89Q96FK6 387 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-207ENST00000467819 SLC2A9Q9NRM0 540 aa15.88■□□□□ 0.13
COL9A3-207ENST00000467819 RRP15Q9Y3B9 282 aaKnown RBP15.88■□□□□ 0.13
COL9A3-207ENST00000467819 OR11H12B2RN74 326 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 SCGNO76038 276 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 AREGP15514 252 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 ARL3P36405 182 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 KIR2DS2P43631 304 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 BRWD1-AS2P59051 145 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 GABARAPL2P60520 117 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 UBE2UQ5VVX9 321 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 CLEC19AQ6UXS0 136 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 CCDC140Q96MF4 163 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 FANCD2OSQ96PS1 177 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 ZC4H2Q9NQZ6 224 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 TECRQ9NZ01 308 aaKnown RBP15.87■□□□□ 0.13
COL9A3-207ENST00000467819 HYDINQ4G0P3 5121 aa15.87■□□□□ 0.13
COL9A3-207ENST00000467819 LGALS9O00182 355 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 TNFSF12O43508 249 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 REG1AP05451 166 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 ZNF735P0CB33 412 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 MYOD1P15172 320 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 FGF9P31371 208 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-207ENST00000467819 MAS1LP35410 378 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 SFXN4Q6P4A7 337 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 SECTM1Q8WVN6 248 aa15.86■□□□□ 0.13
COL9A3-207ENST00000467819 HRASP01112 189 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 PSMB6P28072 239 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 ARPC4P59998 168 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 ZNF66Q6ZN08 573 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 TPRA1Q86W33 373 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 EEF1AKMT3Q96AZ1 226 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 RHBDL2Q9NX52 303 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 RAB26Q9ULW5 256 aa15.85■□□□□ 0.13
COL9A3-207ENST00000467819 PLECQ15149 4684 aaKnown RBP15.85■□□□□ 0.13
COL9A3-207ENST00000467819 ZNF320A2RRD8 509 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 DHFRP00374 187 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 CRYGCP07315 174 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 PTHLHP12272 177 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 CTRB1P17538 263 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 CBLN1P23435 193 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 RPL8P62917 257 aaKnown RBP15.84■□□□□ 0.13
COL9A3-207ENST00000467819 CTRB2Q6GPI1 263 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 GPHB5Q86YW7 130 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 SPARTQ8N0X7 666 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 BEST4Q8NFU0 473 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 CCL28Q9NRJ3 127 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 SSR3Q9UNL2 185 aa15.84■□□□□ 0.13
COL9A3-207ENST00000467819 MRPS14O60783 128 aaKnown RBP15.83■□□□□ 0.12
COL9A3-207ENST00000467819 JTBO76095 146 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 DEFA4P12838 97 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 FCGR2CP31995 323 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 MXD1Q05195 221 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 FAM106AQ4KMX7 169 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 TMEM61Q8N0U2 210 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 GVQW1Q8N7I0 195 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 IL17DQ8TAD2 202 aa15.83■□□□□ 0.12
COL9A3-207ENST00000467819 ALMS1Q8TCU4 4167 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 BIRC6Q9NR09 4857 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 TRAV18A0A075B6X5 111 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 TMEM213A2RRL7 107 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms