RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 SSX8Q7RTT4 187 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 SLC35E3Q7Z769 313 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 CLDN22Q8N7P3 220 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 SMCR5Q8TEV8 140 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 C8orf76Q96K31 380 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 TMEM222Q9H0R3 208 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 CISHQ9NSE2 258 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 VPS29Q9UBQ0 182 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 KLK5Q9Y337 293 aaPredicted RBP1.88□□□□□ -2.11
VPS13A-209ENST00000467124 LTBP2Q14767 1821 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 TMEM235A6NFC5 223 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 GGT3PA6NGU5 568 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 BHLHE40O14503 412 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF705DP0CH99 300 aaPredicted RBP1.87□□□□□ -2.11
VPS13A-209ENST00000467124 CA5AP35218 305 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 CSN1S1P47710 185 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 OMPP47874 163 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 OR4D2P58180 307 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 AP3S2P59780 193 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 KRTAP10-1P60331 282 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 HIST3H3Q16695 136 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 SYPL2Q5VXT5 272 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 Q6ZS52 159 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 S100A7AQ86SG5 101 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 LHFPL1Q86WI0 220 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 KLF6Q99612 283 aaPredicted RBP1.87□□□□□ -2.11
VPS13A-209ENST00000467124 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.87□□□□□ -2.11
VPS13A-209ENST00000467124 NAT8Q9UHE5 227 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 GRIN2BQ13224 1484 aa1.87□□□□□ -2.11
VPS13A-209ENST00000467124 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 A0A0G2JQZ4 141 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 A0A0J9YY10 115 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 A0A1B0GVG6 124 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 A0A1B0GX78 115 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 SMIM9A6NGZ8 99 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 KNCNA6PVL3 124 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 KPNA3O00505 521 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-209ENST00000467124 ATP5HO75947 161 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 NPYP01303 97 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 PPBPP02775 128 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 CD79AP11912 226 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 HLA-DMBP28068 263 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 FXYD7P58549 80 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 FKBP1AP62942 108 aaKnown RBP1.86□□□□□ -2.11
VPS13A-209ENST00000467124 GRK1Q15835 563 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF705AQ6ZN79 300 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-209ENST00000467124 LRRC28Q86X40 367 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-209ENST00000467124 KRTAP13-1Q8IUC0 172 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 ACOT12Q8WYK0 555 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 ULBP3Q9BZM4 244 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 AK3Q9UIJ7 227 aa1.86□□□□□ -2.11
VPS13A-209ENST00000467124 COL5A1P20908 1838 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-209ENST00000467124 WRNQ14191 1432 aaPredicted RBP eCLIP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 TRBV20OR9-2A0A075B6H5 130 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 TRGV5A0A0B4J1U4 118 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 FAM236DA0A1B0GTK5 79 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 J3QQQ9 107 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 PSMD12O00232 456 aaPredicted RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 FAAHO00519 579 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 LEPROTO15243 131 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 KLRC4O43908 158 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 CNIH1O95406 144 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 OR5G3P0C626 314 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 FAM236CP0DP71 79 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 RPL28P46779 137 aaKnown RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 RAP1GDS1P52306 607 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 RPS20P60866 119 aaKnown RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 RPL26P61254 145 aaKnown RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 MRPS15P82914 257 aaKnown RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 FADDQ13158 208 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF767PQ75MW2 155 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 ANKRD29Q8N6D5 301 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 MRPS24Q96EL2 167 aaKnown RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF471Q9BX82 626 aaPredicted RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 RPL26L1Q9UNX3 145 aaKnown RBP1.85□□□□□ -2.11
VPS13A-209ENST00000467124 FUT9Q9Y231 359 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 TIMM22Q9Y584 194 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 PCNX2A6NKB5 2137 aa1.85□□□□□ -2.11
VPS13A-209ENST00000467124 ARHGAP32A7KAX9 2087 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 A0A087WUJ7 227 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 C2orf74A8MZ97 194 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 KRT75O95678 551 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 SRP19P09132 144 aaKnown RBP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 RPL5P46777 297 aaKnown RBP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 HAAOP46952 286 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 IDH3GP51553 393 aaPredicted RBP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 AP1S1P61966 158 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 REEP5Q00765 189 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 RUNX1Q01196 453 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 SRSF6Q13247 344 aaKnown RBP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 MIAQ16674 131 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 ACOT6Q3I5F7 207 aaPredicted RBP1.84□□□□□ -2.11
VPS13A-209ENST00000467124 GLT8D1Q68CQ7 371 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF283Q8N7M2 679 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 OR5J2Q8NH18 312 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 DCUN1D1Q96GG9 259 aa1.84□□□□□ -2.11
VPS13A-209ENST00000467124 TTTY12Q9BZ98 90 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms