RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 STX12Q86Y82 276 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 LINC00311Q8N616 119 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 CT45A3Q8NHU0 189 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 TNFRSF14Q92956 283 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 MMP26Q9NRE1 261 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-215ENST00000465457 CTSZQ9UBR2 303 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 FBXL17Q9UF56 701 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 A0A087X0M5 115 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 A0A1B0GX30 115 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 hCG_1809904A0A1W2PP81 198 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 A0A1W2PPE2 198 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 A0A1W2PR64 198 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 A0A1W2PRV1 198 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 C17orf98A8MV24 154 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 CAV2P51636 162 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 POLR2GP62487 172 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF266Q14584 549 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF273Q14593 569 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 CXorf66Q5JRM2 361 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-215ENST00000465457 PRAMEF5Q5TYX0 476 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 LYPD2Q6UXB3 125 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 H2BFWTQ7Z2G1 175 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 UBAC2Q8NBM4 344 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 OR8B3Q8NGG8 313 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 NEIL1Q96FI4 390 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-215ENST00000465457 OR8B2Q96RD0 313 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 CITED1Q99966 193 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 NUP50Q9UKX7 468 aa11.2□□□□□ -0.62
HDAC6-215ENST00000465457 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 LINC00473A8K010 186 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 SYNGR2O43760 224 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 RAMP3O60896 148 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 S1PR2O95136 353 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 NMBP08949 121 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-215ENST00000465457 RRASP10301 218 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 IL3RAP26951 378 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF134P52741 427 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 RELBQ01201 579 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 EWSR1Q01844 656 aaKnown RBP eCLIP11.19□□□□□ -0.62
HDAC6-215ENST00000465457 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 C8orf46Q8TAG6 207 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF596Q8TC21 504 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 DDB2Q92466 427 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-215ENST00000465457 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 PFDN2Q9UHV9 154 aa11.19□□□□□ -0.62
HDAC6-215ENST00000465457 A0A0G2JRQ6 117 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 MEX3AA1L020 520 aaKnown RBP11.18□□□□□ -0.62
HDAC6-215ENST00000465457 CLDN34H7C241 214 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 CHST1O43916 411 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 FCGR3BO75015 233 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 KRASP01116 189 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 IGHV4-38-2P0DP08 117 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 NQO2P16083 231 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF816Q0VGE8 651 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-215ENST00000465457 RTL8BQ17RB0 113 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 NCR3LG1Q68D85 454 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-215ENST00000465457 R3HDM4Q96D70 268 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 ARV1Q9H2C2 271 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 SESN1Q9Y6P5 492 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 PLXNB1O43157 2135 aa11.18□□□□□ -0.62
HDAC6-215ENST00000465457 DSCAML1Q8TD84 2053 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 M0QZ24 198 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 SLC31A2O15432 143 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 DFFBO76075 338 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 HRASP01112 189 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 GATA3P23771 443 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 G6PCP35575 357 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 SULT1A1P50225 295 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 DLX6P56179 175 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 BRWD1-AS2P59051 145 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 HBG1P69891 147 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 HBG2P69892 147 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 RPL39P5Q59GN2 51 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 OR2B11Q5JQS5 317 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 RPL7L1Q6DKI1 246 aaKnown RBP11.17□□□□□ -0.62
HDAC6-215ENST00000465457 Q6ZRM9 215 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF833PQ6ZTB9 187 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 STPG2Q8N412 459 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 OR9G1Q8NH87 305 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 ZNF251Q9BRH9 671 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 MAGT1Q9H0U3 335 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 TNFRSF19Q9NS68 423 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
HDAC6-215ENST00000465457 IGSF23A1L1A6 192 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 PROP1O75360 226 aa11.16□□□□□ -0.62
HDAC6-215ENST00000465457 APOA2P02652 100 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms