RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 C11orf68Q9H3H3 251 aaKnown RBP2.51□□□□□ -2.01
ITGB1-208ENST00000464001 SIPA1L1O43166 1804 aa2.51□□□□□ -2.01
ITGB1-208ENST00000464001 N4BP2Q86UW6 1770 aaPredicted RBP2.51□□□□□ -2.01
ITGB1-208ENST00000464001 SOGA1O94964 1423 aa2.51□□□□□ -2.01
ITGB1-208ENST00000464001 ROCK2O75116 1388 aaKnown RBP2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ABCC12Q96J65 1359 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 FER1L6Q2WGJ9 1857 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 CDK5RAP2Q96SN8 1893 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 IGLV11-55A0A075B6I3 123 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 TRAV4A0A0B4J268 109 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 IGHV1-69-2A0A0G2JMI3 117 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 IGHV7-4-1A0A0J9YVY3 117 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 A0A0J9YY10 115 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 A0A1B0GX78 115 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 RGS5O15539 181 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 SCO1O75880 301 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 NDUFC2O95298 119 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 CXorf1O96002 111 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 PDYNP01213 254 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 APCSP02743 223 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 MAS1P04201 325 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 GYPCP04921 128 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 IGHV4-34P06331 123 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 BPGMP07738 259 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 HTR1AP08908 422 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF688P0C7X2 276 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF806P0C7X5 589 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 SMIM17P0DL12 118 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 RPL7P18124 248 aaKnown RBP2.5□□□□□ -2.01
ITGB1-208ENST00000464001 NPY1RP25929 384 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 CA7P43166 264 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 GNA12Q03113 381 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF616Q08AN1 781 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 OR8B8Q15620 311 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 IL17AQ16552 155 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 PLPPR5Q32ZL2 321 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 TNFAIP8L3Q5GJ75 292 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 FAM78AQ5JUQ0 283 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 Q6ZS49 121 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 LINC01551Q86U37 167 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 C12orf45Q8N5I9 185 aaPredicted RBP2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF283Q8N7M2 679 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 SGMS2Q8NHU3 365 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 SLC25A40Q8TBP6 338 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 GPR119Q8TDV5 335 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF721Q8TF20 911 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 MBD3L1Q8WWY6 194 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 PLEKHB2Q96CS7 222 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 STARD4Q96DR4 205 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 MS4A6EQ96DS6 147 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 PDXPQ96GD0 296 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 IP6K3Q96PC2 410 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF382Q96SR6 550 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 NMNAT3Q96T66 252 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 PLA2G12AQ9BZM1 189 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 KCNIP2Q9NS61 270 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 MED11Q9P086 117 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 TAAR3PQ9P1P4 343 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 TNS2Q63HR2 1409 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 SSH2Q76I76 1423 aa2.5□□□□□ -2.01
ITGB1-208ENST00000464001 CARMIL3Q8ND23 1372 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 PTPRJQ12913 1337 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 EML6Q6ZMW3 1958 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 NCKAP5O14513 1909 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 ARL5CA6NH57 179 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 MIF4GDA9UHW6 222 aaKnown RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 C11orf94C9JXX5 98 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 DEGS1O15121 323 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 GSTZ1O43708 216 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 CST8O60676 142 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 PFDN1O60925 122 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 BANF1O75531 89 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 IGHV1-8P0DP01 117 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 CD28P10747 220 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 COX4I1P13073 169 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF823P16415 610 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 RPS3P23396 243 aaKnown RBP eCLIP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 BLVRBP30043 206 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 PPP1CCP36873 323 aaKnown RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 SERPINB10P48595 397 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF140P52738 457 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 BSPH1Q075Z2 132 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 GRK1Q15835 563 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 ZFAND6Q6FIF0 208 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 NTM-AS1Q6ZSK4 140 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 H1FOOQ8IZA3 346 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 SLC22A24Q8N4F4 322 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 PACRGLQ8N7B6 248 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF615Q8N8J6 731 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 OR4D11Q8NGI4 311 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 CIRBP-AS1Q8TBR5 109 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 ZNF675Q8TD23 568 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 RAB2BQ8WUD1 216 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 THEM6Q8WUY1 208 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 RTN4IP1Q8WWV3 396 aaPredicted RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 CAPZA3Q96KX2 299 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 HSPB9Q9BQS6 159 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 VPS25Q9BRG1 176 aa2.49□□□□□ -2.01
ITGB1-208ENST00000464001 RPP21Q9H633 154 aaKnown RBP2.49□□□□□ -2.01
ITGB1-208ENST00000464001 TPT1P8Q9HAU6 139 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms