RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 DIABLOQ9NR28 239 aa14.35□□□□□ -0.11
SF3A1-205ENST00000463818 CCL28Q9NRJ3 127 aa14.35□□□□□ -0.11
SF3A1-205ENST00000463818 A8MZ25 164 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 TEX22C9J3V5 150 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 BMPR1BO00238 502 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 OR2J3O76001 311 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 FCER2P06734 321 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 NECAP1Q8NC96 275 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 MUC7Q8TAX7 377 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 TMEM167AQ8TBQ9 72 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 SECTM1Q8WVN6 248 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 FYTTD1Q96QD9 318 aaKnown RBP14.34□□□□□ -0.11
SF3A1-205ENST00000463818 AUNIPQ9H7T9 357 aa14.34□□□□□ -0.11
SF3A1-205ENST00000463818 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.33□□□□□ -0.12
SF3A1-205ENST00000463818 A0A0A6YYH2 397 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 A6NJ64 397 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 E7EUB6 86 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 TNFSF12O43508 249 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 KBTBD11O94819 623 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 MAS1LP35410 378 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 TGFBR1P36897 503 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 RPL27AP46776 148 aaKnown RBP14.33□□□□□ -0.12
SF3A1-205ENST00000463818 MECP2P51608 486 aaKnown RBP14.33□□□□□ -0.12
SF3A1-205ENST00000463818 SSX9Q7RTT3 188 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 TM2D3Q9BRN9 247 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 SLC2A9Q9NRM0 540 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 PEMTQ9UBM1 199 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 ZNF257Q9Y2Q1 563 aa14.33□□□□□ -0.12
SF3A1-205ENST00000463818 DPPA5A6NC42 116 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 IZUMO1RA6ND01 250 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 HRASP01112 189 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 RPS19P39019 145 aaKnown RBP14.32□□□□□ -0.12
SF3A1-205ENST00000463818 KIR2DS2P43631 304 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 MSMO1Q15800 293 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 CTF1Q16619 201 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 C15orf32Q32M92 178 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 C19orf35Q6ZS72 473 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 Q8N402 240 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 SLC25A46Q96AG3 418 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 FBXL7Q9UJT9 491 aa14.32□□□□□ -0.12
SF3A1-205ENST00000463818 A0A1B0GW64 132 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 PPYP01298 95 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 ZNF735P0CB33 412 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 NCS1P62166 190 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 LCN12Q6JVE5 192 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 ADAMTSL5Q6ZMM2 481 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 SPAG16Q8N0X2 631 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 KCTD12Q96CX2 325 aaKnown RBP14.31□□□□□ -0.12
SF3A1-205ENST00000463818 THAP7Q9BT49 309 aaPredicted RBP14.31□□□□□ -0.12
SF3A1-205ENST00000463818 SLC5A7Q9GZV3 580 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 DMRT1Q9Y5R6 373 aa14.31□□□□□ -0.12
SF3A1-205ENST00000463818 NPIPB5A8MRT5 1133 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 PPP5D1E7EU14 171 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 NDUFB8O95169 186 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 MYOD1P15172 320 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 CBX5P45973 191 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 CASC10Q5T4H9 136 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 GTSCR1Q86UQ5 136 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 GIMAP1Q8WWP7 306 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 FANCD2OSQ96PS1 177 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 AIFM2Q9BRQ8 373 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 TUBA4BQ9H853 241 aa14.3□□□□□ -0.12
SF3A1-205ENST00000463818 MEIS3P1A6NDR6 274 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 OR2C1O95371 312 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 HLA-AP01891 365 aaKnown RBP14.29□□□□□ -0.12
SF3A1-205ENST00000463818 CRYGCP07315 174 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 AREGP15514 252 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 PSMB6P28072 239 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 FXYD4P59646 89 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 RPL8P62917 257 aaKnown RBP14.29□□□□□ -0.12
SF3A1-205ENST00000463818 FAM209BQ5JX69 171 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 OR5AP2Q8NGF4 316 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 OR2K2Q8NGT1 345 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 CITED4Q96RK1 184 aa14.29□□□□□ -0.12
SF3A1-205ENST00000463818 SULT1C2O00338 296 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 RBFOX2O43251 390 aaKnown RBP eCLIP14.28□□□□□ -0.12
SF3A1-205ENST00000463818 XRCC3O43542 346 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 GGCTO75223 188 aaKnown RBP14.28□□□□□ -0.12
SF3A1-205ENST00000463818 IGHV3-23P01764 117 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 LYL1P12980 280 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 HLA-GP17693 338 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 VBP1P61758 197 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 LSM3P62310 102 aaKnown RBP14.28□□□□□ -0.12
SF3A1-205ENST00000463818 HAGHQ16775 308 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 CD300EQ496F6 205 aaPredicted RBP14.28□□□□□ -0.12
SF3A1-205ENST00000463818 OR4A47Q6IF82 309 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 OR4A5Q8NH83 315 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 S100A16Q96FQ6 103 aaKnown RBP14.28□□□□□ -0.12
SF3A1-205ENST00000463818 BCL7BQ9BQE9 202 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 NAA50Q9GZZ1 169 aaKnown RBP14.28□□□□□ -0.12
SF3A1-205ENST00000463818 HRASLSQ9HDD0 168 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 BET1LQ9NYM9 111 aa14.28□□□□□ -0.12
SF3A1-205ENST00000463818 DNAH7Q8WXX0 4024 aa14.27□□□□□ -0.12
SF3A1-205ENST00000463818 ZNF785A8K8V0 405 aa14.27□□□□□ -0.13
SF3A1-205ENST00000463818 DHFRP00374 187 aa14.27□□□□□ -0.13
SF3A1-205ENST00000463818 CTRB1P17538 263 aa14.27□□□□□ -0.13
SF3A1-205ENST00000463818 KLK9Q2XQG4 91 aa14.27□□□□□ -0.13
SF3A1-205ENST00000463818 DEFB114Q30KQ6 69 aa14.27□□□□□ -0.13
SF3A1-205ENST00000463818 CTRB2Q6GPI1 263 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms