RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PRELID3BQ9Y3B1 194 aa10.7□□□□□ -0.7
SMC1A-204ENST00000463684 TSPAN4O14817 238 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 CRYGCP07315 174 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 IL6RP08887 468 aaPredicted RBP10.69□□□□□ -0.7
SMC1A-204ENST00000463684 MED14OSP0DP75 135 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 CTRB1P17538 263 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 PSMB6P28072 239 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 PLAC9Q5JTB6 97 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 CTRB2Q6GPI1 263 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 NANOGP1Q8N7R0 232 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 CYGBQ8WWM9 190 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 RARRES2Q99969 163 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 CENPOQ9BU64 300 aa10.69□□□□□ -0.7
SMC1A-204ENST00000463684 MRPS7Q9Y2R9 242 aaKnown RBP10.69□□□□□ -0.7
SMC1A-204ENST00000463684 VPS13DQ5THJ4 4388 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 SLC17A2O00624 439 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 CDK1P06493 297 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 FCGR3AP08637 254 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 ZNF735P0CB33 412 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 FCGR2BP31994 310 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-204ENST00000463684 MAS1LP35410 378 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 RANBP1P43487 201 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 PSMD7P51665 324 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 RAB11BQ15907 218 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 PLET1Q6UQ28 207 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 OR2A7Q96R45 310 aa10.68□□□□□ -0.7
SMC1A-204ENST00000463684 IGHV3-35A0A0C4DH35 117 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 ERICH4A6NGS2 130 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 OR4C46A6NHA9 309 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 E7EUB6 86 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 DENRO43583 198 aaKnown RBP10.67□□□□□ -0.7
SMC1A-204ENST00000463684 KBTBD11O94819 623 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 AREGP15514 252 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 ARFRP1Q13795 201 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 ODF3L2Q3SX64 289 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 AHSA2Q719I0 299 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 KCTD9Q7L273 389 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 PQLC1Q8N2U9 271 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 OR5B3Q8NH48 314 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 MAFIPQ8WZ33 124 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 RAB3CQ96E17 227 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
SMC1A-204ENST00000463684 MFSD2BA6NFX1 497 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 MPTX1A8MV57 137 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 IGLL5B9A064 214 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 J3QRK9 145 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 UCHL1P09936 223 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 CRHBPP24387 322 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 GPR183P32249 361 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 KLK9Q2XQG4 91 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 C2orf76Q3KRA6 126 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 OR2B11Q5JQS5 317 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 H1FOOQ8IZA3 346 aaPredicted RBP10.66□□□□□ -0.7
SMC1A-204ENST00000463684 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 TMEM167AQ8TBQ9 72 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 S100A14Q9HCY8 104 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 PSORS1C1Q9UIG5 152 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 KLK9Q9UKQ9 250 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 KCNK7Q9Y2U2 307 aa10.66□□□□□ -0.7
SMC1A-204ENST00000463684 AK6Q9Y3D8 172 aaKnown RBP10.66□□□□□ -0.7
SMC1A-204ENST00000463684 IGLV11-55A0A075B6I3 123 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 XRCC3O43542 346 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 SLC22A5O76082 557 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 REG1AP05451 166 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 CD36P16671 472 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 TALDO1P37837 337 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 CLDN12P56749 244 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 SSX1Q16384 188 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 PUSL1Q8N0Z8 303 aaKnown RBP10.65□□□□□ -0.7
SMC1A-204ENST00000463684 OR11H2Q8NH07 326 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 OR4S2Q8NH73 311 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 CD300LFQ8TDQ1 290 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 FAM3DQ96BQ1 224 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 MND1Q9BWT6 205 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 ZNF436Q9C0F3 470 aaPredicted RBP10.65□□□□□ -0.7
SMC1A-204ENST00000463684 C11orf68Q9H3H3 251 aaKnown RBP10.65□□□□□ -0.7
SMC1A-204ENST00000463684 THYN1Q9P016 225 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 RAB22AQ9UL26 194 aa10.65□□□□□ -0.7
SMC1A-204ENST00000463684 A0A1B0GW64 132 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 S1PR2O95136 353 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 RPA2P15927 270 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 GADD45AP24522 165 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
SMC1A-204ENST00000463684 RPL30P62888 115 aaKnown RBP10.64□□□□□ -0.71
SMC1A-204ENST00000463684 APRG1Q8IVJ8 170 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 DHRSXQ8N5I4 330 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 GVQW1Q8N7I0 195 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 BPIFB6Q8NFQ5 453 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 ZNF502Q8TBZ5 544 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 GFI1Q99684 422 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
SMC1A-204ENST00000463684 APLNQ9ULZ1 77 aa10.64□□□□□ -0.71
SMC1A-204ENST00000463684 A0A075B6Q4 140 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 C11orf94C9JXX5 98 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 RAB27BO00194 218 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 TGOLN2O43493 480 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 HRASP01112 189 aa10.63□□□□□ -0.71
SMC1A-204ENST00000463684 GNB3P16520 340 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms