RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SSBP2P81877 361 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 PJVKQ0ZLH3 352 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 VMA21Q3ZAQ7 101 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 LIN54Q6MZP7 749 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 OR2A7Q96R45 310 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 RAB18Q9NP72 206 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 SH2D7A6NKC9 451 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 M0QZK8 103 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 UPK2O00526 184 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 KBTBD11O94819 623 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 OR9G9P0C7N8 305 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 SRSF2Q01130 221 aaKnown RBP11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 TATDN3Q17R31 274 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 IZUMO4Q1ZYL8 232 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 NMSQ5H8A3 153 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 Q6ZRM9 215 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 Q6ZS46 218 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 PPP1R27Q86WC6 154 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 C12orf45Q8N5I9 185 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 DMBX1Q8NFW5 382 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 COQ8AQ8NI60 647 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 VSTM2AQ8TAG5 236 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 LSM10Q969L4 123 aaKnown RBP11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 GPR146Q96CH1 333 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 MMP24Q9Y5R2 645 aa11.01□□□□□ -0.65
PHACTR4-203ENST00000463428 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 DUXBA0A1W2PPF3 345 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 ATG12O94817 140 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 HLA-DRB1P01911 266 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 VDAC1P21796 283 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
PHACTR4-203ENST00000463428 ERVK-16P61578 105 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 RELBQ01201 579 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 PRSS8Q16651 343 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 PRIMA1Q86XR5 153 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 OR4A5Q8NH83 315 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 PHB2Q99623 299 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 HSPB9Q9BQS6 159 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 ZNF430Q9H8G1 570 aaPredicted RBP11□□□□□ -0.65
PHACTR4-203ENST00000463428 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
PHACTR4-203ENST00000463428 ALG5Q9Y673 324 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 NF1P21359 2839 aa11□□□□□ -0.65
PHACTR4-203ENST00000463428 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
PHACTR4-203ENST00000463428 IGHV7-81A0A0B4J1V7 117 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 TRIM77I1YAP6 450 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 CREBL2O60519 120 aaPredicted RBP10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 ADAP1O75689 374 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 AKR1C2P52895 323 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 CX3CL1P78423 397 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 H2BFWTQ7Z2G1 175 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 FAM219AQ8IW50 185 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 Q8N2B8 174 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 TAF15Q92804 592 aaKnown RBP eCLIP10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 CLCC1Q96S66 551 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
PHACTR4-203ENST00000463428 LINC01548A6NM66 108 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 TSPAN9O75954 239 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 CA2P00918 260 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 IGHG2P01859 326 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 FGF2P09038 288 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 HOXB5P09067 269 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 PLGLAQ15195 96 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 C2orf68Q2NKX9 166 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 GGNBP1Q5YKI7 109 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 ZNF562Q6V9R5 426 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 Q6ZSV7 163 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 MMD2Q8IY49 270 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 RRNAD1Q96FB5 475 aaKnown RBP10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 NPFFR1Q9GZQ6 430 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 OR51J1Q9H342 316 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 RANBP3Q9H6Z4 567 aaPredicted RBP10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 NSG2Q9Y328 171 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 TMED3Q9Y3Q3 217 aa10.98□□□□□ -0.65
PHACTR4-203ENST00000463428 PIGBOS1A0A0B4J2F0 54 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 CGB1A6NKQ9 187 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 MPTX1A8MV57 137 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 EGR2P11161 476 aaPredicted RBP10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 MYOD1P15172 320 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 HLA-GP17693 338 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 RPL8P62917 257 aaKnown RBP10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 NDPQ00604 133 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 AARDQ4LEZ3 155 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 Q6ZNX1 250 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 PRSS22Q9GZN4 317 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 TMEM14BQ9NUH8 114 aa10.97□□□□□ -0.65
PHACTR4-203ENST00000463428 A0A1B0GW64 132 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 C15orf61A6NNL5 157 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 E7EUB6 86 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 PITX3O75364 302 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 MAS1LP35410 378 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 FOXRED2Q8IWF2 684 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 UXS1Q8NBZ7 420 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 CACNG5Q9UF02 275 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 FOXA2Q9Y261 457 aaPredicted RBP10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 FBXO7Q9Y3I1 522 aa10.96□□□□□ -0.65
PHACTR4-203ENST00000463428 TEX50A0A1B0GTY4 177 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 A0A1B0GU03 582 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms