RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 MEIS3P1A6NDR6 274 aa15.06■□□□□ 0
VARS-221ENST00000463184 SSBP2P81877 361 aaPredicted RBP15.06■□□□□ 0
VARS-221ENST00000463184 ZNF343Q6P1L6 599 aa15.06■□□□□ 0
VARS-221ENST00000463184 Q8N402 240 aa15.06■□□□□ 0
VARS-221ENST00000463184 USMG5Q96IX5 58 aa15.06■□□□□ 0
VARS-221ENST00000463184 GINS4Q9BRT9 223 aa15.06■□□□□ 0
VARS-221ENST00000463184 TINAGL1Q9GZM7 467 aaPredicted RBP15.06■□□□□ 0
VARS-221ENST00000463184 SLC35D1Q9NTN3 355 aa15.06■□□□□ 0
VARS-221ENST00000463184 ANAPC10Q9UM13 185 aa15.06■□□□□ 0
VARS-221ENST00000463184 A6NHS1 94 aa15.05■□□□□ -0
VARS-221ENST00000463184 IGLV2-23P01705 113 aa15.05■□□□□ -0
VARS-221ENST00000463184 CRYGBP07316 175 aa15.05■□□□□ -0
VARS-221ENST00000463184 CSN3P07498 182 aa15.05■□□□□ -0
VARS-221ENST00000463184 NAT1P18440 290 aa15.05■□□□□ -0
VARS-221ENST00000463184 TNFSF8P32971 234 aa15.05■□□□□ -0
VARS-221ENST00000463184 ARPC4P59998 168 aa15.05■□□□□ -0
VARS-221ENST00000463184 PJVKQ0ZLH3 352 aa15.05■□□□□ -0
VARS-221ENST00000463184 IL17DQ8TAD2 202 aa15.05■□□□□ -0
VARS-221ENST00000463184 ABHD1Q96SE0 405 aa15.05■□□□□ -0
VARS-221ENST00000463184 M0R1X1 148 aa15.04■□□□□ -0
VARS-221ENST00000463184 JTBO76095 146 aa15.04■□□□□ -0
VARS-221ENST00000463184 S100A5P33763 92 aa15.04■□□□□ -0
VARS-221ENST00000463184 H1FOOQ8IZA3 346 aaPredicted RBP15.04■□□□□ -0
VARS-221ENST00000463184 SNAPC3Q92966 411 aa15.04■□□□□ -0
VARS-221ENST00000463184 FCER2P06734 321 aa15.03■□□□□ -0
VARS-221ENST00000463184 MRPS10P82664 201 aaKnown RBP15.03■□□□□ -0
VARS-221ENST00000463184 TAGLNQ01995 201 aaKnown RBP15.03■□□□□ -0
VARS-221ENST00000463184 IL18Q14116 193 aa15.03■□□□□ -0
VARS-221ENST00000463184 RPEL1Q2QD12 228 aa15.03■□□□□ -0
VARS-221ENST00000463184 BVESQ8NE79 360 aa15.03■□□□□ -0
VARS-221ENST00000463184 OR5AP2Q8NGF4 316 aa15.03■□□□□ -0
VARS-221ENST00000463184 OR2K2Q8NGT1 345 aa15.03■□□□□ -0
VARS-221ENST00000463184 HARBI1Q96MB7 349 aa15.03■□□□□ -0
VARS-221ENST00000463184 BATF3Q9NR55 127 aa15.03■□□□□ -0
VARS-221ENST00000463184 OR2A4O95047 310 aa15.02■□□□□ -0
VARS-221ENST00000463184 MECP2P51608 486 aaKnown RBP15.02■□□□□ -0
VARS-221ENST00000463184 CBX3Q13185 183 aa15.02■□□□□ -0
VARS-221ENST00000463184 DYRK1AQ13627 763 aa15.02■□□□□ -0
VARS-221ENST00000463184 COA4Q9NYJ1 87 aa15.02■□□□□ -0
VARS-221ENST00000463184 PEMTQ9UBM1 199 aa15.02■□□□□ -0
VARS-221ENST00000463184 FABP12A6NFH5 140 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 CTDSPLO15194 276 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 TRBV12-3P01733 135 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 RCVRNP35243 200 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 TAS2R46P59540 309 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 CDK10Q15131 360 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 TMEM177Q53S58 311 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 LINC00322Q6ZN03 302 aaPredicted RBP15.01□□□□□ -0.01
VARS-221ENST00000463184 OR52I2Q8NH67 350 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 FCAMRQ8WWV6 532 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 PHB2Q99623 299 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 SOSTQ9BQB4 213 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 HIPK2Q9H2X6 1198 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 SDHAF2Q9NX18 166 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 OR2W1Q9Y3N9 320 aa15.01□□□□□ -0.01
VARS-221ENST00000463184 RBM7Q9Y580 266 aaKnown RBP15.01□□□□□ -0.01
VARS-221ENST00000463184 IZUMO1RA6ND01 250 aa15□□□□□ -0.01
VARS-221ENST00000463184 GABARAPH6UMI1 98 aa15□□□□□ -0.01
VARS-221ENST00000463184 SHOXO15266 292 aa15□□□□□ -0.01
VARS-221ENST00000463184 NFYAP23511 347 aaPredicted RBP15□□□□□ -0.01
VARS-221ENST00000463184 DEFA5Q01523 94 aa15□□□□□ -0.01
VARS-221ENST00000463184 RNASE12Q5GAN4 147 aaKnown RBP15□□□□□ -0.01
VARS-221ENST00000463184 LYSMD2Q8IV50 215 aa15□□□□□ -0.01
VARS-221ENST00000463184 OR2D2Q9H210 308 aa15□□□□□ -0.01
VARS-221ENST00000463184 MTFP1Q9UDX5 166 aa15□□□□□ -0.01
VARS-221ENST00000463184 MSGN1A6NI15 193 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 SRRM4A7MD48 611 aaKnown RBP14.99□□□□□ -0.01
VARS-221ENST00000463184 TUSC2O75896 110 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 RRASP10301 218 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 RTL8BQ17RB0 113 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 TEX45Q8NA69 505 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 ADAD2Q8NCV1 583 aaKnown RBP14.99□□□□□ -0.01
VARS-221ENST00000463184 OR5H2Q8NGV7 314 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 SMIM4Q8WVI0 70 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 GIMAP1Q8WWP7 306 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 KLK11Q9UBX7 282 aa14.99□□□□□ -0.01
VARS-221ENST00000463184 PMP2P02689 132 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 OR9G9P0C7N8 305 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 HLA-DMAP28067 261 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 FCGR2CP31995 323 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 CD81P60033 236 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 SSBP1Q04837 148 aaKnown RBP14.98□□□□□ -0.01
VARS-221ENST00000463184 MRGPRG-AS1Q2M3A8 158 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 VMA21Q3ZAQ7 101 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 CCDC190Q86UF4 302 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 PLEKHA3Q9HB20 300 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 RETNQ9HD89 108 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 EHFQ9NZC4 300 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 HYDINQ4G0P3 5121 aa14.98□□□□□ -0.01
VARS-221ENST00000463184 FAM223BA6NKX1 122 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 RBMXL2O75526 392 aaKnown RBP14.97□□□□□ -0.01
VARS-221ENST00000463184 SLC22A5O76082 557 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 APELAP0DMC3 54 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 PTBP1P26599 531 aaKnown RBP eCLIP14.97□□□□□ -0.01
VARS-221ENST00000463184 HRH1P35367 487 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 RFX2P48378 723 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 DHRS11Q6UWP2 260 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 FAM223AQ8IWN6 122 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 NEURL2Q9BR09 285 aa14.97□□□□□ -0.01
VARS-221ENST00000463184 SLC2A8Q9NY64 477 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms