RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SIGLEC9Q9Y336 463 aa11.43□□□□□ -0.58
COL6A1-202ENST00000463060 TNCP24821 2201 aa11.43□□□□□ -0.58
COL6A1-202ENST00000463060 UPK2O00526 184 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 CCSO14618 274 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 NBR2O15453 112 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 SLC25A17O43808 307 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 CRLF1O75462 422 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 OR2F2O95006 317 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 OR2A4O95047 310 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 SIX6O95475 246 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 AMY1AP04745 511 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 FGF2P09038 288 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 SRD5A1P18405 259 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 C5orf64Q2M2E5 130 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 SSX9Q7RTT3 188 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 H2BFWTQ7Z2G1 175 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 TMEM86BQ8N661 226 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 DMBX1Q8NFW5 382 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 OR4A5Q8NH83 315 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 ZDHHC16Q969W1 377 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 RRNAD1Q96FB5 475 aaKnown RBP11.42□□□□□ -0.58
COL6A1-202ENST00000463060 WDR89Q96FK6 387 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-202ENST00000463060 OR2A7Q96R45 310 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 FBXL15Q9H469 300 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 TPSG1Q9NRR2 321 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 COA4Q9NYJ1 87 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 MGAT4CQ9UBM8 478 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 PITPNC1Q9UKF7 332 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 POMT1Q9Y6A1 747 aa11.42□□□□□ -0.58
COL6A1-202ENST00000463060 hCG_2014768A0A024R1R8 64 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 FCN1O00602 326 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-202ENST00000463060 KBTBD11O94819 623 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 IFNA21P01568 189 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 TRAPPC2P0DI81 140 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 TRAPPC2BP0DI82 140 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 AKR1C2P52895 323 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 ERVK-16P61578 105 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 SSBP2P81877 361 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-202ENST00000463060 PJVKQ0ZLH3 352 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 SCGB2A2Q13296 93 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 MMDQ15546 238 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 VMA21Q3ZAQ7 101 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 FOXRED2Q8IWF2 684 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 VSTM2AQ8TAG5 236 aa11.41□□□□□ -0.58
COL6A1-202ENST00000463060 GOSR2O14653 212 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 FGF16O43320 207 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 CHST1O43916 411 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 SMCO1Q147U7 214 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 LY6EQ16553 131 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 PRSS8Q16651 343 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 GSG1LQ6UXU4 331 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 C16orf82Q7Z2V1 217 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 C5orf56Q8N8D9 126 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 ZBTB8BQ8NAP8 495 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-202ENST00000463060 OR4D5Q8NGN0 318 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 C2orf50Q96LR7 162 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 SLC25A33Q9BSK2 321 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 ZNF430Q9H8G1 570 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-202ENST00000463060 ESM1Q9NQ30 184 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 C1RLQ9NZP8 487 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 METTL1Q9UBP6 276 aaKnown RBP11.4□□□□□ -0.58
COL6A1-202ENST00000463060 CACNG5Q9UF02 275 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-202ENST00000463060 NSG2Q9Y328 171 aa11.4□□□□□ -0.58
COL6A1-202ENST00000463060 C13orf42A0A1B0GVH6 325 aa11.39□□□□□ -0.59
COL6A1-202ENST00000463060 CLDN34H7C241 214 aa11.39□□□□□ -0.59
COL6A1-202ENST00000463060 FAM157CP0CG43 387 aa11.39□□□□□ -0.59
COL6A1-202ENST00000463060 ID3Q02535 119 aa11.39□□□□□ -0.59
COL6A1-202ENST00000463060 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-202ENST00000463060 PDLIM3Q53GG5 364 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-202ENST00000463060 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
COL6A1-202ENST00000463060 RANBP3Q9H6Z4 567 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-202ENST00000463060 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
COL6A1-202ENST00000463060 PLXNB1O43157 2135 aa11.39□□□□□ -0.59
COL6A1-202ENST00000463060 C5orf51A6NDU8 294 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 CGB1A6NKQ9 187 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 NCBP2LA6PVI3 153 aaKnown RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 RPL8P62917 257 aaKnown RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 CXorf66Q5JRM2 361 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 MMD2Q8IY49 270 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 RNASE11Q8TAA1 199 aaKnown RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 SPIN2AQ99865 258 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 SPIN2BQ9BPZ2 258 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 QTRT1Q9BXR0 403 aaKnown RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 CHIAQ9BZP6 476 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 NMES1Q9C002 83 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 ZNF436Q9C0F3 470 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 KIAA1456Q9P272 454 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 PRNDQ9UKY0 176 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 MOB4Q9Y3A3 225 aa11.38□□□□□ -0.59
COL6A1-202ENST00000463060 TET2Q6N021 2002 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-202ENST00000463060 NF1P21359 2839 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms