RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	SLC16A13	Q7RTY0	426 aa		9.82	□□□□□ -0.84
RBM39-223	ENST00000463004	LRP11	Q86VZ4	500 aa		9.82	□□□□□ -0.84
RBM39-223	ENST00000463004	MBNL3	Q9NUK0	354 aa	Known RBP	9.82	□□□□□ -0.84
RBM39-223	ENST00000463004	C17orf98	A8MV24	154 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	MOS	P00540	346 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	KIAA0141	Q14154	515 aa	Predicted RBP	9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	OR4A47	Q6IF82	309 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	SSMEM1	Q8WWF3	244 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	MED12	Q93074	2177 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	UPK2	O00526	184 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	CHEK1	O14757	476 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	DUT	P33316	252 aa	Known RBP	9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	RPL39P5	Q59GN2	51 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	CLRN3	Q8NCR9	226 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	C20orf24	Q9BUV8	137 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	ZNF257	Q9Y2Q1	563 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004		A0A1W2PNU3	283 aa	Predicted RBP	9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	C5orf63	A6NC05	138 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	WISP1	O95388	367 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	FAM201A	Q5SY85	155 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	WDR73	Q6P4I2	378 aa		9.81	□□□□□ -0.84
RBM39-223	ENST00000463004	HABP2	Q14520	560 aa	Predicted RBP	9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	OR8I2	Q8N0Y5	310 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	TNFRSF19	Q9NS68	423 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	IGKV1D-13	A0A0B4J2D9	117 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	BMPR1B	O00238	502 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	IGKV1-13	P0DP09	117 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	HIST1H1E	P10412	219 aa	Known RBP	9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	RSPO1	Q2MKA7	263 aa	Predicted RBP	9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	C1orf147	Q96MC9	270 aa	Predicted RBP	9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	BET1L	Q9NYM9	111 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	MPDZ	O75970	2070 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	UNQ5815/PRO19632	Q6UWF5	114 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	C16orf82	Q7Z2V1	217 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	BAGE3	Q86Y29	109 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	BAGE2	Q86Y30	109 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	PAXX	Q9BUH6	204 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	GATC	O43716	136 aa	Known RBP	9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	GNLY	P22749	145 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	FXYD3	Q14802	87 aa		9.8	□□□□□ -0.84
RBM39-223	ENST00000463004	SAA2-SAA4	A0A096LPE2	208 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	LINC00869	P0C866	280 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	SAA2	P0DJI9	122 aa	Predicted RBP	9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	WT1	P19544	449 aa	Predicted RBP	9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	ERVK11-1	P61568	191 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	LRRC75B	Q2VPJ9	315 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	DNAJC4	Q9NNZ3	241 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	C15orf61	A6NNL5	157 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	PAFAH1B2	P68402	229 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	PAX5	Q02548	391 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	ECSCR	Q19T08	205 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	LY6G6F	Q5SQ64	297 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	CLEC9A	Q6UXN8	241 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	CD177	Q8N6Q3	437 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	IFI27L2	Q9H2X8	130 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	PSPN	O60542	156 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	C8orf88	P0DMB2	117 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	BPIFA4P	Q86YQ2	179 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	LEAP2	Q969E1	77 aa		9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	MRPL20	Q9BYC9	149 aa	Known RBP	9.79	□□□□□ -0.84
RBM39-223	ENST00000463004	IGKV1D-8	A0A087WSZ0	117 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	IGHV3-72	A0A0B4J1Y9	119 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	IGSF23	A1L1A6	192 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004		G3V3Q6	166 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	ARL3	P36405	182 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	REL	Q04864	619 aa	Predicted RBP	9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	AUP1	Q9Y679	476 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	ID1	P41134	155 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	WDR25	Q64LD2	544 aa	Predicted RBP	9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	OR4D5	Q8NGN0	318 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	GAFA1	Q96PS6	74 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	DOK5	Q9P104	306 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	RD3L	P0DJH9	198 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	NTF4	P34130	210 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	RND2	P52198	227 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	EEF1AKMT3	Q96AZ1	226 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	DCTN5	Q9BTE1	182 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	HSPB7	Q9UBY9	170 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004		E7EQL1	145 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	PAGE4	O60829	102 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	CGA	P01215	116 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	FGF8	P55075	233 aa	Predicted RBP	9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	SPNS3	Q6ZMD2	512 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	OR10G8	Q8NGN5	311 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	RBM14	Q96PK6	669 aa	Known RBP	9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	TLNRD1	Q9H1K6	362 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	URGCP-MRPS24	S4R325	110 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	ZNF407	Q9C0G0	2248 aa		9.78	□□□□□ -0.84
RBM39-223	ENST00000463004	SLC25A16	P16260	332 aa		9.77	□□□□□ -0.84
RBM39-223	ENST00000463004	RPL7	P18124	248 aa	Known RBP	9.77	□□□□□ -0.84
RBM39-223	ENST00000463004	MEF2B	Q02080	365 aa	Predicted RBP	9.77	□□□□□ -0.84
RBM39-223	ENST00000463004	TRAV14DV4	A0A0A6YYC5	116 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004	ZNF320	A2RRD8	509 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004	HELT	A6NFD8	242 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	9.77	□□□□□ -0.85
RBM39-223	ENST00000463004		F8VVB4	439 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004		F8VWA3	439 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004	RAB5A	P20339	215 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004	OR5I1	Q13606	314 aa		9.77	□□□□□ -0.85
RBM39-223	ENST00000463004	OR51G1	Q8NGK1	321 aa		9.77	□□□□□ -0.85

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