RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 A6NNC1 897 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 MARCH11A6NNE9 402 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 AP4M1O00189 453 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
HDAC6-213ENST00000462730 LY6HO94772 140 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 HPRT1P00492 218 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 DAOP14920 347 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 RAB5AP20339 215 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 HSD17B11Q8NBQ5 300 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 PBDC1Q9BVG4 233 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 ZNF462Q96JM2 2506 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 RBFOX2O43251 390 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDAC6-213ENST00000462730 IGHV2-70P01814 119 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 SULT1A1P50225 295 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 UBE2KP61086 200 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 ZNF266Q14584 549 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 HEPN1Q6WQI6 88 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 SLC25A48Q6ZT89 311 aaKnown RBP11.87□□□□□ -0.51
HDAC6-213ENST00000462730 SLC16A13Q7RTY0 426 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 DDB2Q92466 427 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 SLC35B3Q9H1N7 401 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 UNKLQ9H9P5 680 aaKnown RBP11.87□□□□□ -0.51
HDAC6-213ENST00000462730 FBXO7Q9Y3I1 522 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 hCG_1809904A0A1W2PP81 198 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 A0A1W2PR64 198 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 A0A1W2PRV1 198 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 RBMXL2O75526 392 aaKnown RBP11.87□□□□□ -0.51
HDAC6-213ENST00000462730 THBS3P49746 956 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 TAS2R30P59541 319 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 RAB2AP61019 212 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 FABP9Q0Z7S8 132 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 ZNRD1Q9P1U0 126 aa11.87□□□□□ -0.51
HDAC6-213ENST00000462730 YLPM1P49750 1951 aaKnown RBP11.87□□□□□ -0.51
HDAC6-213ENST00000462730 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 DOPEY1Q5JWR5 2465 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 FLNCQ14315 2725 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 COL12A1Q99715 3063 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 ERVK-16P61578 105 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-213ENST00000462730 SSX9Q7RTT3 188 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 FAM24BQ8N5W8 94 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 OR4S2Q8NH73 311 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 ADTRPQ96IZ2 230 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 ATP5SQ99766 215 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 MIOXQ9UGB7 285 aa11.86□□□□□ -0.51
HDAC6-213ENST00000462730 CLN5O75503 358 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 OR9G9P0C7N8 305 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 METTL15P1P0C7V9 234 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 SPANXN5Q5MJ07 72 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 FAM213BQ8TBF2 198 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-213ENST00000462730 ARG1P05089 322 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 CDKN1AP38936 164 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 DLX6P56179 175 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 OR2B8PP59922 312 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 TMEM155Q4W5P6 130 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 NEU4Q8WWR8 484 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-213ENST00000462730 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
HDAC6-213ENST00000462730 QTRT1Q9BXR0 403 aaKnown RBP11.85□□□□□ -0.51
HDAC6-213ENST00000462730 A0A1B0GV50 99 aa11.84□□□□□ -0.51
HDAC6-213ENST00000462730 A0A1W2PPE2 198 aa11.84□□□□□ -0.51
HDAC6-213ENST00000462730 NQO2P16083 231 aa11.84□□□□□ -0.51
HDAC6-213ENST00000462730 ATP6V0CP27449 155 aa11.84□□□□□ -0.51
HDAC6-213ENST00000462730 VKORC1L1Q8N0U8 176 aa11.84□□□□□ -0.51
HDAC6-213ENST00000462730 RAB39BQ96DA2 213 aa11.84□□□□□ -0.51
HDAC6-213ENST00000462730 TRBV23-1A0A0A0MS06 115 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 CEBPZOSA8MTT3 80 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 DFFBO76075 338 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 FSTL3O95633 263 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 OR8U8P0C7N1 319 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 ARL16Q0P5N6 197 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 SPINK9Q5DT21 86 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 HAPLN4Q86UW8 402 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 GPR37O15354 613 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 TGOLN2O43493 480 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 SOHLH1Q5JUK2 328 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 OR4A16Q8NH70 328 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 RARRES2Q99969 163 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
HDAC6-213ENST00000462730 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 IFNA5P01569 189 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 CT45A6P0DMU7 189 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 CT45A5P0DMU8 189 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 CT45A7P0DMV0 189 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 HBG1P69891 147 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 HBG2P69892 147 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 SLC25A24Q6NUK1 477 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 ZNF841Q6ZN19 808 aa11.82□□□□□ -0.52
HDAC6-213ENST00000462730 ZNF833PQ6ZTB9 187 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms