RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 RPL8P62917 257 aaKnown RBP5.05□□□□□ -1.6
SF3B1-206ENST00000462613 CX3CL1P78423 397 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 EIF4EBP1Q13541 118 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-206ENST00000462613 POU2AF1Q16633 256 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 ECSCRQ19T08 205 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM95Q3KNT9 176 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM128Q5BJH2 165 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 THOC7Q6I9Y2 204 aaKnown RBP5.05□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM65Q6PI78 240 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 UNQ5815/PRO19632Q6UWF5 114 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 SLC25A42Q86VD7 318 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF695Q8IW36 515 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 OR5AU1Q8NGC0 362 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 OR5M8Q8NGP6 311 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 OR4A16Q8NH70 328 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 SGMS2Q8NHU3 365 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 GRPEL2Q8TAA5 225 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 ENKURQ8TC29 256 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 GPHA2Q96T91 129 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 NAA60Q9H7X0 242 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 CACFD1Q9UGQ2 172 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 GPR132Q9UNW8 380 aa5.05□□□□□ -1.6
SF3B1-206ENST00000462613 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 IGHV7-81A0A0B4J1V7 117 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TRAV41A0A0B4J266 112 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 A0A1W2PN81 502 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TCRBV4S1A1TA0A5B7 111 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 CRYM-AS1A6NIL9 109 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 ATP6V0E1O15342 81 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 UPK1BO75841 260 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 IGLV2-23P01705 113 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 ELANEP08246 267 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 FGF2P09038 288 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 OR5AC1P0C628 307 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 VAMP1P23763 118 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 UCP1P25874 307 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 SLC6A1P30531 599 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 G6PCP35575 357 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 CHRNA7P36544 502 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 PRSS8Q16651 343 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 C2orf68Q2NKX9 166 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 AKIRIN2Q53H80 203 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 FBLN7Q53RD9 439 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 OR4A47Q6IF82 309 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 HSD17B13Q7Z5P4 300 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 FAM219AQ8IW50 185 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 VKORC1L1Q8N0U8 176 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 CADM3Q8N126 398 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 LGI3Q8N145 548 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM167AQ8TBQ9 72 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 SRSF12Q8WXF0 261 aaKnown RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TAF15Q92804 592 aaKnown RBP eCLIP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 RBPMSQ93062 196 aaKnown RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 GALNT14Q96FL9 552 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 RITA1Q96K30 269 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM56Q96MV1 263 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 HSPB9Q9BQS6 159 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 WNT10AQ9GZT5 417 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM222Q9H0R3 208 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 C5orf66Q9H5L9 145 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 SLA2Q9H6Q3 261 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF430Q9H8G1 570 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF355PQ9NSJ1 428 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 ZFP57Q9NU63 452 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 PRNDQ9UKY0 176 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 FOXA2Q9Y261 457 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-206ENST00000462613 WNK1Q9H4A3 2382 aa5.04□□□□□ -1.6
SF3B1-206ENST00000462613 ZFHX3Q15911 3703 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 DUXBA0A1W2PPF3 345 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 SRRM4A7MD48 611 aaKnown RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 NUDT19A8MXV4 375 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 H3BUA1 57 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 UPK2O00526 184 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 FCN1O00602 326 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 NDUFB6O95139 128 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 HLA-AP01891 365 aaKnown RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 CRYGBP07316 175 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 PF4V1P10720 104 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 HLA-GP17693 338 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 MECP2P51608 486 aaKnown RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 CCR6P51684 374 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 CRIP2P52943 208 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 FOXE3Q13461 319 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 C4orf46Q504U0 113 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM268Q5VZI3 342 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 Q6ZS46 218 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 ZNF329Q86UD4 541 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 NDUFA11Q86Y39 141 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 PUSL1Q8N0Z8 303 aaKnown RBP5.03□□□□□ -1.6
SF3B1-206ENST00000462613 LFNGQ8NES3 379 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 OR4F17Q8NGA8 305 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 OR1L8Q8NGR8 309 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 OR5B3Q8NH48 314 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 COQ8AQ8NI60 647 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 IL22RA2Q969J5 263 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 MRGPRFQ96AM1 343 aa5.03□□□□□ -1.6
SF3B1-206ENST00000462613 NOL4LQ96MY1 436 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms