RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 BRI3O95415 125 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 CSN3P07498 182 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 RPL27AP46776 148 aaKnown RBP11.81□□□□□ -0.52
NUP50-213ENST00000461437 SCAND1P57086 179 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 ZNF818PQ6ZRF7 136 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 Q8N1Y9 231 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 SAMD12Q8N8I0 201 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 TSPAN14Q8NG11 270 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 TMEM167AQ8TBQ9 72 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 USMG5Q96IX5 58 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 SPIN2AQ99865 258 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 SPIN2BQ9BPZ2 258 aa11.81□□□□□ -0.52
NUP50-213ENST00000461437 TRBV9A0A0B4J1U6 114 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 PMP2P02689 132 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 IGHV4-30-4P0DP06 118 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 TAS2R20P59543 309 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 NCS1P62166 190 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 OR4A47Q6IF82 309 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 ZNF66Q6ZN08 573 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 SPAG16Q8N0X2 631 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 OR51H1Q8NH63 302 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 RCHY1Q96PM5 261 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 IFT46Q9NQC8 304 aa11.8□□□□□ -0.52
NUP50-213ENST00000461437 A0A087WXM4 84 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 A0A0A6YYH2 397 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 A6NJ64 397 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 XRCC3O43542 346 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 CREBL2O60519 120 aaPredicted RBP11.79□□□□□ -0.52
NUP50-213ENST00000461437 NDUFB8O95169 186 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 EIF4EP06730 217 aaKnown RBP11.79□□□□□ -0.52
NUP50-213ENST00000461437 RFX2P48378 723 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 TIMM50Q3ZCQ8 353 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 UBE2NLQ5JXB2 153 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 ADAMTSL5Q6ZMM2 481 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 OR5AP2Q8NGF4 316 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 EHFQ9NZC4 300 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 FBXL7Q9UJT9 491 aa11.79□□□□□ -0.52
NUP50-213ENST00000461437 DYNC2H1Q8NCM8 4307 aaKnown RBP11.78□□□□□ -0.52
NUP50-213ENST00000461437 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 FAM223BA6NKX1 122 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 S1PR2O95136 353 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 ZNF735P0CB33 412 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 VBP1P61758 197 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 TMEM69Q5SWH9 247 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 FAM223AQ8IWN6 122 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 S100A16Q96FQ6 103 aaKnown RBP11.78□□□□□ -0.52
NUP50-213ENST00000461437 FANCD2OSQ96PS1 177 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 HRASLSQ9HDD0 168 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 DMRT1Q9Y5R6 373 aa11.78□□□□□ -0.52
NUP50-213ENST00000461437 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.77□□□□□ -0.53
NUP50-213ENST00000461437 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 HRASP01112 189 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 GNRHRP30968 328 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.53
NUP50-213ENST00000461437 AADACL3Q5VUY0 350 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 VSTM2AQ8TAG5 236 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 GIMAP1Q8WWP7 306 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 ZNF2Q9BSG1 426 aaPredicted RBP11.77□□□□□ -0.53
NUP50-213ENST00000461437 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 SLC2A9Q9NRM0 540 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
NUP50-213ENST00000461437 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 OR2C1O95371 312 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 RLN1P04808 185 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 HLA-GP17693 338 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 PSMB6P28072 239 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 KIR2DS2P43631 304 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 CBX5P45973 191 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 HERV-K104P61576 105 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 THAP7Q9BT49 309 aaPredicted RBP11.76□□□□□ -0.53
NUP50-213ENST00000461437 FUNDC2Q9BWH2 189 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 NAA50Q9GZZ1 169 aaKnown RBP11.76□□□□□ -0.53
NUP50-213ENST00000461437 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 ANAPC10Q9UM13 185 aa11.76□□□□□ -0.53
NUP50-213ENST00000461437 MFSD2BA6NFX1 497 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 UPK2O00526 184 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 CTRB1P17538 263 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 OR2B8PP59922 312 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 CATR1Q13166 79 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 TATDN3Q17R31 274 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 CD300EQ496F6 205 aaPredicted RBP11.75□□□□□ -0.53
NUP50-213ENST00000461437 RNASE12Q5GAN4 147 aaKnown RBP11.75□□□□□ -0.53
NUP50-213ENST00000461437 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 CROCCP3Q8IVE0 287 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 SGPP2Q8IWX5 399 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 ZBTB34Q8NCN2 500 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 OR10W1Q8NGF6 305 aa11.75□□□□□ -0.53
NUP50-213ENST00000461437 OR5H2Q8NGV7 314 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms