RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 RPEQ96AT9 228 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 PINX1Q96BK5 328 aaKnown RBP5.54□□□□□ -1.52
MSH2-204ENST00000461394 SAT2Q96F10 170 aaPredicted RBP5.54□□□□□ -1.52
MSH2-204ENST00000461394 BBC3Q96PG8 261 aaPredicted RBP5.54□□□□□ -1.52
MSH2-204ENST00000461394 OR4C12Q96R67 309 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 NABP2Q9BQ15 211 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 TMEM147Q9BVK8 224 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 PLEKHA3Q9HB20 300 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 TREM1Q9NP99 234 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 SIRT7Q9NRC8 400 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 MED9Q9NWA0 146 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 PRNDQ9UKY0 176 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 TCF19Q9Y242 345 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 WASHC3Q9Y3C0 194 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 AUP1Q9Y679 476 aa5.54□□□□□ -1.52
MSH2-204ENST00000461394 DSPP15924 2871 aaKnown RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 IGHV3-72A0A0B4J1Y9 119 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 A0A1W2PRD5 423 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 A0A1W2PRF3 423 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 A0A1W2PRM7 423 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 A1L4Q6 167 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 NUDT19A8MXV4 375 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 C22orf46C9J442 243 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 H0YJW9 148 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 UPK2O00526 184 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 AGPAT2O15120 278 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 RBP4P02753 201 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 OPN1MWP04001 364 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 IFNA4P05014 189 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 SAA1P0DJI8 122 aaPredicted RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 OPN1MW2P0DN77 364 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 OPN1MW3P0DN78 364 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 SPP1P10451 314 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 IGFBP2P18065 325 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 FGF7P21781 194 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 MC5RP33032 325 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 F2RL1P55085 397 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 LCN2P80188 198 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 RUNX1Q01196 453 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 DIAPH2-AS1Q14236 149 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 HNF4GQ14541 408 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 PLGLAQ15195 96 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 ATP6V1FQ16864 119 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 HLA-DRB5Q30154 266 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 ETV3LQ6ZN32 361 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 ZNF525Q8N782 197 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 ZNF709Q8N972 641 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 OR4C13Q8NGP0 309 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 OR52E5Q8NH55 327 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 VSTM2AQ8TAG5 236 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 C8orf46Q8TAG6 207 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 OSR1Q8TAX0 266 aaPredicted RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 RBMXL1Q96E39 390 aaKnown RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 PIMREGQ9BSJ6 248 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 REG4Q9BYZ8 158 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 COMMD5Q9GZQ3 224 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 MS4A7Q9GZW8 240 aaPredicted RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 ARV1Q9H2C2 271 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 PARP11Q9NR21 331 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 MMP26Q9NRE1 261 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 UQCC1Q9NVA1 299 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 FKBP11Q9NYL4 201 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 FOXA2Q9Y261 457 aaPredicted RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 FBXO7Q9Y3I1 522 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 INSIG2Q9Y5U4 225 aa5.53□□□□□ -1.52
MSH2-204ENST00000461394 KLF2Q9Y5W3 355 aaPredicted RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 TLN1Q9Y490 2541 aaKnown RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 TET2Q6N021 2002 aaPredicted RBP5.53□□□□□ -1.52
MSH2-204ENST00000461394 A0A087X0M5 115 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 A0A1B0GX30 115 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 RAB19A4D1S5 217 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 KRBOX1C9JBD0 128 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 C17orf112F2Z3M2 114 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 BUB1B-PAK6H3BSN5 160 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 TRIM77I1YAP6 450 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 M0R1W7 72 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 C1QL1O75973 258 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 KBTBD11O94819 623 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 IGKV1-16P04430 117 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 FAM157CP0CG43 387 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 MYOD1P15172 320 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 ZP3P21754 424 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 CEACAM3P40198 252 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 ELLP55199 621 aaPredicted RBP5.52□□□□□ -1.53
MSH2-204ENST00000461394 LGALS4P56470 323 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 HSPE1P61604 102 aaKnown RBP5.52□□□□□ -1.53
MSH2-204ENST00000461394 ARL16Q0P5N6 197 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 PJVKQ0ZLH3 352 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 KLRD1Q13241 179 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 TMEM14EPQ6UXP3 125 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 IL34Q6ZMJ4 242 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 VMO1Q7Z5L0 202 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 HAPLN4Q86UW8 402 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 BEND2Q8NDZ0 799 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 BPIFCQ8NFQ6 507 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 OR5AN1Q8NGI8 311 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 FAM168AQ92567 244 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 PCGF1Q9BSM1 259 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 RSG1Q9BU20 258 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms