RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 OR2G3Q8NGZ4 309 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 OR5B3Q8NH48 314 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 VSTM2AQ8TAG5 236 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 TMEM167AQ8TBQ9 72 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
SFPQ-202ENST00000460428 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
SFPQ-202ENST00000460428 WDR61Q9GZS3 305 aaKnown RBP6.53□□□□□ -1.36
SFPQ-202ENST00000460428 TCF19Q9Y242 345 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 WASHC3Q9Y3C0 194 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 AMMECR1Q9Y4X0 333 aaPredicted RBP6.53□□□□□ -1.36
SFPQ-202ENST00000460428 KPTNQ9Y664 436 aa6.53□□□□□ -1.36
SFPQ-202ENST00000460428 TRAV1-1A0A0B4J248 108 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 A0A1B0GW64 132 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 CEBPZOSA8MTT3 80 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 ODF3BA8MYP8 253 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 FNDC10F2Z333 226 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 H3BP45 60 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 NDUFS8O00217 210 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 NDUFS7O75251 213 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 IGLV2-23P01705 113 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 CRYGBP07316 175 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 ZP3P21754 424 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 USF1P22415 310 aaPredicted RBP6.52□□□□□ -1.37
SFPQ-202ENST00000460428 CDKN1AP38936 164 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 PRCDQ00LT1 54 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 TMEM267Q0VDI3 215 aaPredicted RBP6.52□□□□□ -1.37
SFPQ-202ENST00000460428 DIAPH2-AS1Q14236 149 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 BSXQ3C1V8 233 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 HCP5Q6MZN7 132 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 SSX9Q7RTT3 188 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 VKORC1L1Q8N0U8 176 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 TMEM217Q8N7C4 229 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 TEX45Q8NA69 505 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 HSD17B11Q8NBQ5 300 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 OR10P1Q8NGE3 313 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 ZDHHC16Q969W1 377 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 SMDT1Q9H4I9 107 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 ZNRD1Q9P1U0 126 aa6.52□□□□□ -1.37
SFPQ-202ENST00000460428 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
SFPQ-202ENST00000460428 YLPM1P49750 1951 aaKnown RBP6.51□□□□□ -1.37
SFPQ-202ENST00000460428 TEX50A0A1B0GTY4 177 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 BTBD17A6NE02 478 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 OOSP1A8MZH6 123 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 VWC2LB2RUY7 222 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 I3L521 148 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 ENSAO43768 121 aaKnown RBP6.51□□□□□ -1.37
SFPQ-202ENST00000460428 RBMXL2O75526 392 aaKnown RBP6.51□□□□□ -1.37
SFPQ-202ENST00000460428 IFNA17P01571 189 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 CD5P06127 495 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 RNF224P0DH78 156 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 SAA1P0DJI8 122 aaPredicted RBP6.51□□□□□ -1.37
SFPQ-202ENST00000460428 OR2B8PP59922 312 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 LMO4P61968 165 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.374e-7■■■□□ 17.3
SFPQ-202ENST00000460428 SLC38A11Q08AI6 406 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 PMS2P11Q13670 270 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 MRGPRG-AS1Q2M3A8 158 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 C10orf91Q5T1B1 145 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 PVRIGQ6DKI7 326 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 Q6ZRG5 221 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 THNSL2Q86YJ6 484 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 SCGB1C1Q8TD33 95 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 TMEM170AQ8WVE7 144 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 TAF15Q92804 592 aaKnown RBP eCLIP6.51□□□□□ -1.37
SFPQ-202ENST00000460428 CLCC1Q96S66 551 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 MS4A7Q9GZW8 240 aaPredicted RBP6.51□□□□□ -1.37
SFPQ-202ENST00000460428 SH3BGRL3Q9H299 93 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 NDUFA4L2Q9NRX3 87 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 OR51B2Q9Y5P1 312 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 DOCK11Q5JSL3 2073 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 ABCA4P78363 2273 aa6.51□□□□□ -1.37
SFPQ-202ENST00000460428 ARID1AO14497 2285 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 MALRD1Q5VYJ5 2156 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 IGHV1-3A0A0C4DH29 117 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 MPDU1O75352 247 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 IGHV4-39P01824 125 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 ZFP36P26651 326 aaKnown RBP6.5□□□□□ -1.37
SFPQ-202ENST00000460428 CD1BP29016 333 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 MAS1LP35410 378 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 SNCAP37840 140 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 CAMLGP49069 296 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 PDLIM4P50479 330 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 RAB11AP62491 216 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 RPL8P62917 257 aaKnown RBP6.5□□□□□ -1.37
SFPQ-202ENST00000460428 DLK1P80370 383 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 C2orf83Q53S99 150 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 SPSB3Q6PJ21 355 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 LFNGQ8NES3 379 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 OR1L8Q8NGR8 309 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 MBD3L1Q8WWY6 194 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 HARBI1Q96MB7 349 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 SIRPDQ9H106 197 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 HEYLQ9NQ87 328 aaPredicted RBP6.5□□□□□ -1.37
SFPQ-202ENST00000460428 UQCC1Q9NVA1 299 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 DPM3Q9P2X0 92 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 NUP50Q9UKX7 468 aa6.5□□□□□ -1.37
SFPQ-202ENST00000460428 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms