RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF788Q6ZQV5 615 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 HILPDAQ9Y5L2 63 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 PLPPR1Q8TBJ4 325 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 ZNF137PP52743 207 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 ATP5IP56385 69 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-205ENST00000460170 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 NABP2Q9BQ15 211 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 IGHV2OR16-5A0A0B4J2B6 119 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 PGPA6NDG6 321 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 PRNTQ86SH4 94 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 SNRNP40Q96DI7 357 aaKnown RBP12.48□□□□□ -0.41
PTPRU-205ENST00000460170 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 MAP1LC3CQ9BXW4 147 aa12.48□□□□□ -0.41
PTPRU-205ENST00000460170 CSRP2Q16527 193 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 STPG3Q8N7X2 389 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 CRYBB3P26998 211 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 OR51M1Q9H341 326 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 SNRNP200O75643 2136 aaKnown RBP12.47□□□□□ -0.41
PTPRU-205ENST00000460170 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 PLAURQ03405 335 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 ECSCRQ19T08 205 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 M0QZK8 103 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 GGCTO75223 188 aaKnown RBP12.47□□□□□ -0.41
PTPRU-205ENST00000460170 GGNQ86UU5 652 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 HSPB9Q9BQS6 159 aa12.47□□□□□ -0.41
PTPRU-205ENST00000460170 COL4A6Q14031 1691 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 IGKV3D-15A0A087WSY6 115 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 GCGP01275 180 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 HLA-DQA1P01909 254 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 EGR1P18146 543 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 ZNF525Q8N782 197 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 DCTN5Q9BTE1 182 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 OR2T8A6NH00 312 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 PRSS1P07477 247 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 GCHFRP30047 84 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.41
PTPRU-205ENST00000460170 LOC105371267A0A1B0GV96 52 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 F5H697 171 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 BMPR1BO00238 502 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 VENTXO95231 258 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 CA2P00918 260 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 NUBP1P53384 320 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 FAM27E3Q08E93 113 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 GGACTQ9BVM4 153 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 TRAV24A0A0B4J272 114 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 COMPP49747 757 aaPredicted RBP12.46□□□□□ -0.42
PTPRU-205ENST00000460170 SUPT4H1P63272 117 aaKnown RBP12.46□□□□□ -0.42
PTPRU-205ENST00000460170 LRTM2Q8N967 370 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 OR5R1Q8NH85 324 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 GATAD1Q8WUU5 269 aa12.46□□□□□ -0.42
PTPRU-205ENST00000460170 ID3Q02535 119 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 C9orf106Q8NAJ2 232 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 RNF115Q9Y4L5 304 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 CLDN16Q9Y5I7 305 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
PTPRU-205ENST00000460170 BPIFA4PQ86YQ2 179 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 MRPL18Q9H0U6 180 aaKnown RBP12.45□□□□□ -0.42
PTPRU-205ENST00000460170 PNRC2Q9NPJ4 139 aaKnown RBP12.45□□□□□ -0.42
PTPRU-205ENST00000460170 SRSF3P84103 164 aaKnown RBP12.45□□□□□ -0.42
PTPRU-205ENST00000460170 ACSF3Q4G176 576 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-205ENST00000460170 PCSK4Q6UW60 755 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 CYP2G1PQ6ZSU1 146 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 OR51G1Q8NGK1 321 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 PPIAL4CA0A0B4J2A2 164 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 WDR31Q8NA23 367 aa12.45□□□□□ -0.42
PTPRU-205ENST00000460170 OR4A5Q8NH83 315 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 CLDND2Q8NHS1 167 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 LPAR2Q9HBW0 351 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 ELOVL5Q9NYP7 299 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 SCN8AQ9UQD0 1980 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 IL6RP08887 468 aaPredicted RBP12.44□□□□□ -0.42
PTPRU-205ENST00000460170 TFF3Q07654 80 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.44□□□□□ -0.42
PTPRU-205ENST00000460170 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 CD40P25942 277 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 SS18L1O75177 396 aaPredicted RBP12.44□□□□□ -0.42
PTPRU-205ENST00000460170 FXYD3Q14802 87 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 ZNF497Q6ZNH5 498 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 ROS1P08922 2347 aa12.44□□□□□ -0.42
PTPRU-205ENST00000460170 IGHV1-69-2A0A0G2JMI3 117 aa12.43□□□□□ -0.42
PTPRU-205ENST00000460170 FOXG1P55316 489 aaPredicted RBP12.43□□□□□ -0.42
PTPRU-205ENST00000460170 FAM90A1Q86YD7 464 aa12.43□□□□□ -0.42
PTPRU-205ENST00000460170 OSR1Q8TAX0 266 aaPredicted RBP12.43□□□□□ -0.42
PTPRU-205ENST00000460170 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
PTPRU-205ENST00000460170 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
PTPRU-205ENST00000460170 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
PTPRU-205ENST00000460170 KBTBD11-OT1A0A1B0GTJ5 212 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms