RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 OR13F1Q8NGS4 319 aa17.29■□□□□ 0.36
PTPN4-207ENST00000460162 OR5H6Q8NGV6 325 aa17.29■□□□□ 0.36
PTPN4-207ENST00000460162 KCTD12Q96CX2 325 aaKnown RBP17.29■□□□□ 0.36
PTPN4-207ENST00000460162 SPATA25Q9BR10 227 aa17.29■□□□□ 0.36
PTPN4-207ENST00000460162 TRAV18A0A075B6X5 111 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 LOC100506127A0A0U1RQW1 187 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 DPPA5A6NC42 116 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 HMX3A6NHT5 357 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 TMEM127O75204 238 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 HRASP01112 189 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 ZNF735P0CB33 412 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 LYL1P12980 280 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 MECP2P51608 486 aaKnown RBP17.28■□□□□ 0.36
PTPN4-207ENST00000460162 BRWD1-AS2P59051 145 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 IDNKQ5T6J7 187 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 HOGA1Q86XE5 327 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 LAX1Q8IWV1 398 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 RNF167Q9H6Y7 350 aa17.28■□□□□ 0.36
PTPN4-207ENST00000460162 DYNC2H1Q8NCM8 4307 aaKnown RBP17.28■□□□□ 0.36
PTPN4-207ENST00000460162 PPYP01298 95 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 IL6RP08887 468 aaPredicted RBP17.27■□□□□ 0.36
PTPN4-207ENST00000460162 FCGR2CP31995 323 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 GVQW1Q8N7I0 195 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 ZBTB34Q8NCN2 500 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 SECTM1Q8WVN6 248 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 ISOC1Q96CN7 298 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 PALMDQ9NP74 551 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 SLC2A9Q9NRM0 540 aa17.27■□□□□ 0.36
PTPN4-207ENST00000460162 IZUMO1RA6ND01 250 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 RBFOX2O43251 390 aaKnown RBP eCLIP17.26■□□□□ 0.357e-8■□□□□ 11.2
PTPN4-207ENST00000460162 DHFRP00374 187 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 RPL8P62917 257 aaKnown RBP17.26■□□□□ 0.35
PTPN4-207ENST00000460162 OR4A5Q8NH83 315 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 DYNLRB2Q8TF09 96 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 FYTTD1Q96QD9 318 aaKnown RBP17.26■□□□□ 0.35
PTPN4-207ENST00000460162 AIFM2Q9BRQ8 373 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 AUNIPQ9H7T9 357 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 EDA2RQ9HAV5 297 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 DIABLOQ9NR28 239 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 CCL28Q9NRJ3 127 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 BET1LQ9NYM9 111 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 FBXL7Q9UJT9 491 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 RYR2Q92736 4967 aa17.26■□□□□ 0.35
PTPN4-207ENST00000460162 A0A1B0GW64 132 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 E7EUB6 86 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 TNFSF12O43508 249 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 GGCTO75223 188 aaKnown RBP17.25■□□□□ 0.35
PTPN4-207ENST00000460162 CRYGCP07315 174 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 CATR1Q13166 79 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 NEDD8Q15843 81 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 HAGHQ16775 308 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 TIMM50Q3ZCQ8 353 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 KCTD21Q4G0X4 260 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 SSX9Q7RTT3 188 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 GPHA2Q96T91 129 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 TUBA4BQ9H853 241 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 DMRT1Q9Y5R6 373 aa17.25■□□□□ 0.35
PTPN4-207ENST00000460162 PPP5D1E7EU14 171 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 LGALS9O00182 355 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 PTHLHP12272 177 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 HLA-GP17693 338 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 PSMB6P28072 239 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 CBX5P45973 191 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 KLK9Q2XQG4 91 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 CD300EQ496F6 205 aaPredicted RBP17.24■□□□□ 0.35
PTPN4-207ENST00000460162 ADAMTSL5Q6ZMM2 481 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 C19orf35Q6ZS72 473 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 SPAG16Q8N0X2 631 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 FANCD2OSQ96PS1 177 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 KLK9Q9UKQ9 250 aa17.24■□□□□ 0.35
PTPN4-207ENST00000460162 AREGP15514 252 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 HIST1H1BP16401 226 aaKnown RBP17.23■□□□□ 0.35
PTPN4-207ENST00000460162 CTRB1P17538 263 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 CD81P60033 236 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 CTRB2Q6GPI1 263 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 OR4A47Q6IF82 309 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 CCDC140Q96MF4 163 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 SLC5A7Q9GZV3 580 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 SLC2A8Q9NY64 477 aa17.23■□□□□ 0.35
PTPN4-207ENST00000460162 C2orf70A6NJV1 201 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 TAS2R31P59538 309 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 POU2AF1Q16633 256 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 CROCCP3Q8IVE0 287 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 OR5AP2Q8NGF4 316 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 EEF1AKMT3Q96AZ1 226 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 ZC4H2Q9NQZ6 224 aa17.22■□□□□ 0.35
PTPN4-207ENST00000460162 STARD9Q9P2P6 4700 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 TPPPO94811 219 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 HPRT1P00492 218 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 FGF2P09038 288 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 FOLR2P14207 255 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 ARL3P36405 182 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 FXYD4P59646 89 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 GPHB5Q86YW7 130 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 GIMAP1Q8WWP7 306 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 BORCS5Q969J3 196 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 NEURL2Q9BR09 285 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 PLEKHA3Q9HB20 300 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 HRASLSQ9HDD0 168 aa17.21■□□□□ 0.35
PTPN4-207ENST00000460162 TECRQ9NZ01 308 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms