RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 ZNF735P0CB33 412 aa9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 PPP3R1P63098 170 aa9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 SRSF8Q9BRL6 282 aaKnown RBP9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 THTPAQ9BU02 230 aa9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
PCOLCE-202ENST00000460002 C15orf62A8K5M9 175 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 B2RBV5 119 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 CRTAPO75718 401 aaPredicted RBP9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 FAM107AO95990 144 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 RRASP10301 218 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 DEFA4P12838 97 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 PTBP1P26599 531 aaKnown RBP eCLIP9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 PRDX6P30041 224 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 RPL27AP46776 148 aaKnown RBP9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 MNAT1P51948 309 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 DNAJC9Q8WXX5 260 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 ZNF414Q96IQ9 312 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 NIPSNAP3BQ9BS92 247 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 RDH8Q9NYR8 311 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
PCOLCE-202ENST00000460002 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 IGKV1-6A0A0C4DH72 117 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 HLA-DRB3P79483 266 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 TMED1Q13445 227 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 C6orf201Q7Z4U5 140 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 DHFR2Q86XF0 187 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 OSR1Q8TAX0 266 aaPredicted RBP9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 DEFB104AQ8WTQ1 72 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 CMTM3Q96MX0 182 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 OR2D2Q9H210 308 aa9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 CHMP1AQ9HD42 196 aaPredicted RBP9.41□□□□□ -0.9
PCOLCE-202ENST00000460002 CD2P06729 351 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 MS4A2Q01362 244 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 AWAT2Q6E213 333 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 MOB1BQ7L9L4 216 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 ADGRG5Q8IZF4 528 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 DEFB107AQ8IZN7 70 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 MFSD4AQ8N468 514 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 NEDD4LQ96PU5 975 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
PCOLCE-202ENST00000460002 LINC00473A8K010 186 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 IFNA5P01569 189 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 IGFBP3P17936 291 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 MAS1LP35410 378 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 PSMD7P51665 324 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 PLA2G7Q13093 441 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 TTC32Q5I0X7 151 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 VKORC1L1Q8N0U8 176 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 GPR148Q8TDV2 347 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 BSCL2Q96G97 398 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 HDHD3Q9BSH5 251 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 Q9H8V8 135 aa9.39□□□□□ -0.91
PCOLCE-202ENST00000460002 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 CCL18P55774 89 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 TPBGQ13641 420 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 OXA1LQ15070 435 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 Q6ZRN7 208 aaPredicted RBP9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 JAGN1Q8N5M9 183 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 OR6M1Q8NGM8 313 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 RFKQ969G6 155 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 OR51E2Q9H255 320 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 Q9H3A6 140 aa9.38□□□□□ -0.91
PCOLCE-202ENST00000460002 TMEM189A5PLL7 270 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 HMGB1P1B2RPK0 211 aaPredicted RBP9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 NUPL2O15504 423 aaKnown RBP9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 DUTP33316 252 aaKnown RBP9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 GTF2A1P52655 376 aaPredicted RBP9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 UBE2UQ5VVX9 321 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 SPSB3Q6PJ21 355 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 LHFPL3Q86UP9 236 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
PCOLCE-202ENST00000460002 TRAV8-7A0A075B6U6 113 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 TRBV6-6A0A0A6YYG2 114 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 TEX48A0A1B0GUV7 120 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 RPS10-NUDT3A0A1W2PQS6 291 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 KBTBD11O94819 623 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 NUDT3O95989 172 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 OR2G6Q5TZ20 316 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 SYS1Q8N2H4 156 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 CANT1Q8WVQ1 401 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 NEU1Q99519 415 aa9.36□□□□□ -0.91
PCOLCE-202ENST00000460002 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
PCOLCE-202ENST00000460002 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
PCOLCE-202ENST00000460002 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
PCOLCE-202ENST00000460002 OXTP01178 125 aa9.35□□□□□ -0.91
PCOLCE-202ENST00000460002 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 174.1 ms