RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 C19orf35Q6ZS72 473 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 TMEM61Q8N0U2 210 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 PUSL1Q8N0Z8 303 aaKnown RBP9.22□□□□□ -0.93
GPNMB-204ENST00000459927 CACNG8Q8WXS5 425 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 FYTTD1Q96QD9 318 aaKnown RBP9.22□□□□□ -0.93
GPNMB-204ENST00000459927 KRTAP17-1Q9BYP8 105 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 MLXQ9UH92 298 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 RBMX2Q9Y388 322 aaKnown RBP9.22□□□□□ -0.93
GPNMB-204ENST00000459927 TMEM213A2RRL7 107 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 DPPA5A6NC42 116 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 LY6G6CO95867 125 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 ZNF735P0CB33 412 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 C8orf88P0DMB2 117 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 NFYAP23511 347 aaPredicted RBP9.21□□□□□ -0.94
GPNMB-204ENST00000459927 PSMB6P28072 239 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 MAS1LP35410 378 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 MAP2K4P45985 399 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 RPL27AP46776 148 aaKnown RBP9.21□□□□□ -0.94
GPNMB-204ENST00000459927 OR10A3P58181 314 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 ANKRD55Q3KP44 614 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 TM4SF20Q53R12 229 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 MFSD4AQ8N468 514 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 OR52B4Q8NGK2 314 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 TMEM167AQ8TBQ9 72 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 GGTLC1Q9BX51 225 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 ATG5Q9H1Y0 275 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 S4R3C0 116 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.94
GPNMB-204ENST00000459927 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 IGKV1D-13A0A0B4J2D9 117 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 KBTBD11O94819 623 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 SCAF4O95104 1147 aaKnown RBP9.2□□□□□ -0.94
GPNMB-204ENST00000459927 IGKV1-13P0DP09 117 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 AREGP15514 252 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 HIST1H1BP16401 226 aaKnown RBP9.2□□□□□ -0.94
GPNMB-204ENST00000459927 CTRB1P17538 263 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 DTYMKP23919 212 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 EIF4EBP1Q13541 118 aaPredicted RBP9.2□□□□□ -0.94
GPNMB-204ENST00000459927 ARL6IP1Q15041 203 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 SSX1Q16384 188 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 OR2B11Q5JQS5 317 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 CTRB2Q6GPI1 263 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 KCTD9Q7L273 389 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 WFDC3Q8IUB2 231 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 VSTM2AQ8TAG5 236 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 HSD17B10Q99714 261 aaKnown RBP9.2□□□□□ -0.94
GPNMB-204ENST00000459927 CCDC90BQ9GZT6 254 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 DCSTAMPQ9H295 470 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 VCXQ9H320 206 aa9.2□□□□□ -0.94
GPNMB-204ENST00000459927 MRPS7Q9Y2R9 242 aaKnown RBP9.2□□□□□ -0.94
GPNMB-204ENST00000459927 TRBV7-1A0A0A6YYK4 115 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 DHFRP00374 187 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 RAB3BP20337 219 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 CRHBPP24387 322 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 EWSR1Q01844 656 aaKnown RBP eCLIP9.19□□□□□ -0.94
GPNMB-204ENST00000459927 ZNF585BQ52M93 769 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 HACD4Q5VWC8 232 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 OR4A47Q6IF82 309 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 CNIH2Q6PI25 160 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 MRPL27Q9P0M9 148 aaKnown RBP9.19□□□□□ -0.94
GPNMB-204ENST00000459927 SPATA2Q9UM82 520 aa9.19□□□□□ -0.94
GPNMB-204ENST00000459927 TRDV1A0A1B0GX56 115 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 CGB1A6NKQ9 187 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 A8MWP6 167 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 SPRY2O43597 315 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 HRASP01112 189 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 DEFA4P12838 97 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 MYOD1P15172 320 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 CD36P16671 472 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 TNFRSF9Q07011 255 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 CEMP1Q6PRD7 247 aaPredicted RBP9.18□□□□□ -0.94
GPNMB-204ENST00000459927 UNQ9165/PRO28630Q6UXU0 137 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 ZNF66Q6ZN08 573 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 RBPMS2Q6ZRY4 209 aaKnown RBP9.18□□□□□ -0.94
GPNMB-204ENST00000459927 OR2C3Q8N628 320 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 OR4S2Q8NH73 311 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 MARC2Q969Z3 335 aa9.18□□□□□ -0.94
GPNMB-204ENST00000459927 KMT2AQ03164 3969 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 IGLV11-55A0A075B6I3 123 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 A0A0J9YWU9 116 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 GALP22466 123 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 ELLP55199 621 aaPredicted RBP9.17□□□□□ -0.94
GPNMB-204ENST00000459927 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
GPNMB-204ENST00000459927 BTNL8Q6UX41 500 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 Q6ZWC4 215 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 SSX9Q7RTT3 188 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 NR2C2APQ86WQ0 139 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 TCTEX1D2Q8WW35 142 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 NRG4Q8WWG1 115 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 CXorf58Q96LI9 332 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 GPHA2Q96T91 129 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 AIFM2Q9BRQ8 373 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 C5orf66Q9H5L9 145 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 ANXA10Q9UJ72 324 aa9.17□□□□□ -0.94
GPNMB-204ENST00000459927 TP53TG1Q9Y2A0 90 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms