RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 COMMD9Q9P000 198 aa17■□□□□ 0.31
SSNA1-202ENST00000459860 MPPED1O15442 326 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 PTBP1P26599 531 aaKnown RBP eCLIP16.99■□□□□ 0.31
SSNA1-202ENST00000459860 ECI1P42126 302 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 CDX1P47902 265 aaPredicted RBP16.99■□□□□ 0.31
SSNA1-202ENST00000459860 ERVK-16P61578 105 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 C8orf86Q6ZUL3 223 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 OR4D10Q8NGI6 311 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 OR4A5Q8NH83 315 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 TERB2Q8NHR7 220 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 TMEM167AQ8TBQ9 72 aa16.99■□□□□ 0.31
SSNA1-202ENST00000459860 SRSF12Q8WXF0 261 aaKnown RBP16.99■□□□□ 0.31
SSNA1-202ENST00000459860 S1PR2O95136 353 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 SSBP2P81877 361 aaPredicted RBP16.98■□□□□ 0.31
SSNA1-202ENST00000459860 TBC1D26Q86UD7 250 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 PUSL1Q8N0Z8 303 aaKnown RBP16.98■□□□□ 0.31
SSNA1-202ENST00000459860 DMBX1Q8NFW5 382 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 ZFAND1Q8TCF1 268 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 HRASLSQ9HDD0 168 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 SLC2A9Q9NRM0 540 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 BET1LQ9NYM9 111 aa16.98■□□□□ 0.31
SSNA1-202ENST00000459860 ANKRD20A5PA0PJZ0 165 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 CD33P20138 364 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 MAS1LP35410 378 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 RAB9AP51151 201 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 OR4A47Q6IF82 309 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 FAAP20Q6NZ36 180 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 CCDC190Q86UF4 302 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 OR4C16Q8NGL9 310 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 UBE2E2Q96LR5 201 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 SPIN2AQ99865 258 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 PRRT1Q99946 306 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 SPIN2BQ9BPZ2 258 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 THAP7Q9BT49 309 aaPredicted RBP16.97■□□□□ 0.31
SSNA1-202ENST00000459860 SLA2Q9H6Q3 261 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 ZNF355PQ9NSJ1 428 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 VSIG4Q9Y279 399 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 V9GYH0 126 aa16.97■□□□□ 0.31
SSNA1-202ENST00000459860 MSGN1A6NI15 193 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 H3BUA1 57 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 SOX15O60248 233 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 FAUP35544 74 aaKnown RBP16.96■□□□□ 0.31
SSNA1-202ENST00000459860 LPAR6P43657 344 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 AP3S2P59780 193 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 POU2AF1Q16633 256 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 MRGPRG-AS1Q2M3A8 158 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 C18orf65Q6ZTR6 163 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 Q8N402 240 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 CCDC71LQ8N9Z2 235 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 MYOZ3Q8TDC0 251 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 C4orf3Q8WVX3 66 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 KLK15Q9H2R5 256 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 FAM212BQ9NTI7 297 aaPredicted RBP16.96■□□□□ 0.31
SSNA1-202ENST00000459860 COPZ2Q9P299 210 aa16.96■□□□□ 0.31
SSNA1-202ENST00000459860 MYCNOSP40205 109 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 RPL27AP46776 148 aaKnown RBP16.95■□□□□ 0.3
SSNA1-202ENST00000459860 TPPP2P59282 170 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 RND3P61587 244 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 RPL8P62917 257 aaKnown RBP16.95■□□□□ 0.3
SSNA1-202ENST00000459860 ZNF491Q8N8L2 437 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 OR6Q1Q8NGQ2 317 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 TMEM140Q9NV12 185 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 SCP2D1Q9UJQ7 156 aa16.95■□□□□ 0.3
SSNA1-202ENST00000459860 C14orf166Q9Y224 244 aaKnown RBP16.95■□□□□ 0.3
SSNA1-202ENST00000459860 MARCH11A6NNE9 402 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 TRGV3P03979 118 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 ZNF735P0CB33 412 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 PI3P19957 117 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 ETV6P41212 452 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 PIGPP57054 158 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 FOXB2Q5VYV0 432 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 OR5T1Q8NG75 326 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 OR13C8Q8NGS7 320 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 MARCH1Q8TCQ1 289 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 CASTOR1Q8WTX7 329 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 MS4A10Q96PG2 267 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 MCUBQ9NWR8 336 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 COA4Q9NYJ1 87 aa16.94■□□□□ 0.3
SSNA1-202ENST00000459860 SERPINE2P07093 398 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 APELAP0DMC3 54 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 HLA-GP17693 338 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 SURF2Q15527 256 aaPredicted RBP16.93■□□□□ 0.3
SSNA1-202ENST00000459860 ZNF79Q15937 498 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 C10orf55Q5SWW7 151 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 SLC25A42Q86VD7 318 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 C1QL4Q86Z23 238 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 TOMM5Q8N4H5 51 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 TNCP24821 2201 aa16.93■□□□□ 0.3
SSNA1-202ENST00000459860 CCL24O00175 119 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 KRASP01116 189 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 CTSDP07339 412 aaPredicted RBP16.92■□□□□ 0.3
SSNA1-202ENST00000459860 OR9G9P0C7N8 305 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 RPA2P15927 270 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 ZNF585BQ52M93 769 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 ASPHD1Q5U4P2 390 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 ETV3LQ6ZN32 361 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 OR51S1Q8NGJ8 323 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 RAX2Q96IS3 184 aa16.92■□□□□ 0.3
SSNA1-202ENST00000459860 FYTTD1Q96QD9 318 aaKnown RBP16.92■□□□□ 0.3
SSNA1-202ENST00000459860 COMMD5Q9GZQ3 224 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms