RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 RBMXL2O75526 392 aaKnown RBP12□□□□□ -0.49
CHCHD3-204ENST00000457942 OR2J3O76001 311 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 OR2A4O95047 310 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 ZNF45Q02386 682 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 SSX9Q7RTT3 188 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 BEST4Q8NFU0 473 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 OR2A7Q96R45 310 aa12□□□□□ -0.49
CHCHD3-204ENST00000457942 HMX3A6NHT5 357 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 TNFSF12O43508 249 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 KBTBD11O94819 623 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 FCER2P06734 321 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 CSN3P07498 182 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 RPL27AP46776 148 aaKnown RBP11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 VBP1P61758 197 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 Q8N1Y9 231 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 Q8N402 240 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 MFSD4AQ8N468 514 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 TTC9CQ8N5M4 171 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 NECAP1Q8NC96 275 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 DYNLRB2Q8TF09 96 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 SLC25A38Q96DW6 304 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 GPHA2Q96T91 129 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 MRPS26Q9BYN8 205 aaKnown RBP11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 TUBA4BQ9H853 241 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 ZNF257Q9Y2Q1 563 aa11.99□□□□□ -0.49
CHCHD3-204ENST00000457942 BMPR1BO00238 502 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 HRASP01112 189 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 IGLV2-14P01704 120 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 FCGR2CP31995 323 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 RPS19P39019 145 aaKnown RBP11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 KIR2DS2P43631 304 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 SCAND1P57086 179 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 FXYD4P59646 89 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 C15orf32Q32M92 178 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 IL34Q6ZMJ4 242 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 GVQW1Q8N7I0 195 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 DIABLOQ9NR28 239 aa11.98□□□□□ -0.49
CHCHD3-204ENST00000457942 TRBV9A0A0B4J1U6 114 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 PPP5D1E7EU14 171 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 PTHLHP12272 177 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 GPR107Q5VW38 600 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 C19orf35Q6ZS72 473 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 TM2D3Q9BRN9 247 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 HRASLSQ9HDD0 168 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 CCL28Q9NRJ3 127 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
CHCHD3-204ENST00000457942 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 A0A0A6YYH2 397 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 IZUMO1RA6ND01 250 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 A6NJ64 397 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 DHFRP00374 187 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 PPYP01298 95 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 MAS1LP35410 378 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 RPL8P62917 257 aaKnown RBP11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 CATR1Q13166 79 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 TMEM17Q86X19 198 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 HOGA1Q86XE5 327 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 SPAG16Q8N0X2 631 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 IFT46Q9NQC8 304 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 SIGLEC8Q9NYZ4 499 aa11.96□□□□□ -0.49
CHCHD3-204ENST00000457942 MEIS3P1A6NDR6 274 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 A8MZ25 164 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 SULT1C2O00338 296 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 JTBO76095 146 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 HLA-AP01891 365 aaKnown RBP11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 DEFA4P12838 97 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 CD81P60033 236 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 OR2K2Q8NGT1 345 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 AIFM2Q9BRQ8 373 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 AUNIPQ9H7T9 357 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 PLEKHA3Q9HB20 300 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 S4R3C0 116 aa11.95□□□□□ -0.5
CHCHD3-204ENST00000457942 GGCTO75223 188 aaKnown RBP11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 REG1AP05451 166 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 AREGP15514 252 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 HLA-GP17693 338 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 ARL3P36405 182 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 CBX5P45973 191 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 HERV-K104P61576 105 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 GUCA2BQ16661 112 aa11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 CD300EQ496F6 205 aaPredicted RBP11.94□□□□□ -0.5
CHCHD3-204ENST00000457942 AADACL3Q5VUY0 350 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms