RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 LGALS4P56470 323 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 OR2B8PP59922 312 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 PDLIM3Q53GG5 364 aaPredicted RBP10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 LINC01356Q8N9X3 169 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 AJUBAQ96IF1 538 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 RITA1Q96K30 269 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 SMIM8Q96KF7 97 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 FOXA2Q9Y261 457 aaPredicted RBP10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 HILPDAQ9Y5L2 63 aa10.5□□□□□ -0.73
CASC4P1-201ENST00000456608 PRRC2AP48634 2157 aaKnown RBP10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 KANTRA0A1W2PQU2 76 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 IGSF23A1L1A6 192 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 RNF223E7ERA6 249 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 TIMM23O14925 209 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 RBMXL2O75526 392 aaKnown RBP10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 KBTBD11O94819 623 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 IAPPP10997 89 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 GATA3P23771 443 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 TAS2R30P59541 319 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 SPCS3P61009 180 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 RPL23AP62750 156 aaKnown RBP10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 TMEM252Q8N6L7 170 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 OR4A5Q8NH83 315 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 TMEM167AQ8TBQ9 72 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 MALSU1Q96EH3 234 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 Q96MF0 132 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 RNF5Q99942 180 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 CYTL1Q9NRR1 136 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 TMEM14BQ9NUH8 114 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 CACFD1Q9UGQ2 172 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 PRNDQ9UKY0 176 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 AUP1Q9Y679 476 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 WSB1Q9Y6I7 421 aa10.49□□□□□ -0.73
CASC4P1-201ENST00000456608 NPFFO15130 113 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 VENTXO95231 258 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 CRYGBP07316 175 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 CAV2P51636 162 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 HSPE1P61604 102 aaKnown RBP10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 EWSR1Q01844 656 aaKnown RBP eCLIP10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 SSX2Q16385 188 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 CRYBG3Q68DQ2 2970 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 CCDC144NLQ6NUI1 221 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 SLC51BQ86UW2 128 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 VSTM2AQ8TAG5 236 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 DTD1Q8TEA8 209 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 C17orf50Q8WW18 174 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 BSCL2Q96G97 398 aaPredicted RBP10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 SLC25A31Q9H0C2 315 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 HIF1ANQ9NWT6 349 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 PSENENQ9NZ42 101 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 TCF19Q9Y242 345 aa10.48□□□□□ -0.73
CASC4P1-201ENST00000456608 POLQO75417 2590 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 IGHV1-69DA0A0B4J2H0 117 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 CEBPZOSA8MTT3 80 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 TAAR5O14804 337 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 IFNA17P01571 189 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 IGHV1-69P01742 117 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 SAA4P35542 130 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 VDAC2P45880 294 aaPredicted RBP10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 NHLH2Q02577 135 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 MRGPRG-AS1Q2M3A8 158 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 TEX45Q8NA69 505 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 CIB3Q96Q77 187 aaPredicted RBP10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 TSNAXQ99598 290 aaKnown RBP10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 C7orf69Q9H7B7 122 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 FBXL17Q9UF56 701 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 ZNF257Q9Y2Q1 563 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 OR51B2Q9Y5P1 312 aa10.47□□□□□ -0.73
CASC4P1-201ENST00000456608 ABCA12Q86UK0 2595 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 TRAV40A0A0B4J280 105 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 SLC25A17O43808 307 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 LY86O95711 162 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 CFDP00746 253 aaPredicted RBP10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 FGF2P09038 288 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 IGHV4-31P0DP07 118 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 MYOD1P15172 320 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 PAX6P26367 422 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 CNTFRP26992 372 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 UBA52P62987 128 aaKnown RBP10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 BAXQ07812 192 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 EBI3Q14213 229 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 PSG5Q15238 335 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 SPINK9Q5DT21 86 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 TEX261Q6UWH6 196 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 CLEC9AQ6UXN8 241 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 TMEM14EPQ6UXP3 125 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 MAPK1IP1LQ8NDC0 245 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 OR8H1Q8NGG4 311 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 ST8SIA2Q92186 375 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 ZNF471Q9BX82 626 aaPredicted RBP10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 FKBP11Q9NYL4 201 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 NUP50Q9UKX7 468 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 U3KQ87 197 aa10.46□□□□□ -0.73
CASC4P1-201ENST00000456608 H3BP45 60 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms