RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LGALS1P09382 135 aaKnown RBP13.44□□□□□ -0.26
USP39-208ENST00000455732 UCP3P55916 312 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
USP39-208ENST00000455732 LPCAT3Q6P1A2 487 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 OR11H1Q8NG94 326 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 OR51H1Q8NH63 302 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 CASTOR1Q8WTX7 329 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 FCAMRQ8WWV6 532 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 RBM38Q9H0Z9 239 aaKnown RBP13.44□□□□□ -0.26
USP39-208ENST00000455732 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
USP39-208ENST00000455732 MSGN1A6NI15 193 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 CTDSPLO15194 276 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 RLN1P04808 185 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 OR8U8P0C7N1 319 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 MAS1LP35410 378 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 TPPP2P59282 170 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 EGFEM1PQ0D2K5 195 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 RNASE12Q5GAN4 147 aaKnown RBP13.43□□□□□ -0.26
USP39-208ENST00000455732 RNASE10Q5GAN6 216 aaKnown RBP13.43□□□□□ -0.26
USP39-208ENST00000455732 ARRDC1Q8N5I2 433 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 TMEM229BQ8NBD8 167 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 OR4A5Q8NH83 315 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 SMIM4Q8WVI0 70 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 PHB2Q99623 299 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 SPIN2AQ99865 258 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 SPIN2BQ9BPZ2 258 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
USP39-208ENST00000455732 COMMD9Q9P000 198 aa13.43□□□□□ -0.26
USP39-208ENST00000455732 M0QYG6 137 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
USP39-208ENST00000455732 CD74P04233 296 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 CD3DP04234 171 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 FGF2P09038 288 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 NQO2P16083 231 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 F2RP25116 425 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 KRTAP10-11P60412 298 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 DGCR2P98153 550 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 ZNF616Q08AN1 781 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 C10orf55Q5SWW7 151 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 LHFPL1Q86WI0 220 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 SLC38A6Q8IZM9 456 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 OR5T1Q8NG75 326 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 MRAPQ8TCY5 172 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 MS4A10Q96PG2 267 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 RSRP1Q9BUV0 290 aa13.42□□□□□ -0.26
USP39-208ENST00000455732 TINAGL1Q9GZM7 467 aaPredicted RBP13.42□□□□□ -0.26
USP39-208ENST00000455732 S1PR2O95136 353 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 TRGV3P03979 118 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 IFNA6P05013 189 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 IL6RP08887 468 aaPredicted RBP13.41□□□□□ -0.26
USP39-208ENST00000455732 OR9G9P0C7N8 305 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 S100GP29377 79 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 TAS2R19P59542 299 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
USP39-208ENST00000455732 OR4A47Q6IF82 309 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 SSX9Q7RTT3 188 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 CADM3Q8N126 398 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
USP39-208ENST00000455732 DGCR14Q96DF8 476 aaKnown RBP13.41□□□□□ -0.26
USP39-208ENST00000455732 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
USP39-208ENST00000455732 FAM212BQ9NTI7 297 aaPredicted RBP13.41□□□□□ -0.26
USP39-208ENST00000455732 A0A0G2JLM5 398 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 TEX22C9J3V5 150 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 MPPED1O15442 326 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 ZNF735P0CB33 412 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
USP39-208ENST00000455732 RPL27AP46776 148 aaKnown RBP13.4□□□□□ -0.26
USP39-208ENST00000455732 RAB25P57735 213 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 IL18Q14116 193 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 TTC9CQ8N5M4 171 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 MCFD2Q8NI22 146 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 SOSTQ9BQB4 213 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 ALX4Q9H161 411 aaPredicted RBP13.4□□□□□ -0.26
USP39-208ENST00000455732 ZNF355PQ9NSJ1 428 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 COA4Q9NYJ1 87 aa13.4□□□□□ -0.26
USP39-208ENST00000455732 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.26
USP39-208ENST00000455732 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 LINC01619G3V211 115 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 K7EIL1 84 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 APELAP0DMC3 54 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 HLA-GP17693 338 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 PHLDA2Q53GA4 152 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 STEAP1BQ6NZ63 245 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 SLC25A42Q86VD7 318 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 DPF1Q92782 380 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 ZNF486Q96H40 463 aaPredicted RBP13.39□□□□□ -0.27
USP39-208ENST00000455732 USMG5Q96IX5 58 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 TMEM140Q9NV12 185 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
USP39-208ENST00000455732 C13orf42A0A1B0GVH6 325 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 A0A1B0GW64 132 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 MARCH11A6NNE9 402 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 NPIPB5A8MRT5 1133 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 UPK2O00526 184 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 GSTZ1O43708 216 aaPredicted RBP13.38□□□□□ -0.27
USP39-208ENST00000455732 RAB3DO95716 219 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 IGHV3-11P01762 117 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms