RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 S1PR2O95136 353 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 GALP22466 123 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 GPR183P32249 361 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 AHSA2Q719I0 299 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 OR56B1Q8NGI3 324 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 CYGBQ8WWM9 190 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 OR51E2Q9H255 320 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 TRBV7-1A0A0A6YYK4 115 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 TSPAN4O14817 238 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 DIRAS3O95661 229 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 CRYGCP07315 174 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 CD37P11049 281 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 MYOD1P15172 320 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 PSMB6P28072 239 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 LINC00336Q6ZUF6 198 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 KCTD9Q7L273 389 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 OR5B3Q8NH48 314 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 GALNT14Q96FL9 552 aa17.11■□□□□ 0.33
PTPRA-208ENST00000455631 MRPS7Q9Y2R9 242 aaKnown RBP17.11■□□□□ 0.33
PTPRA-208ENST00000455631 A0A1B0GW64 132 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 SLC17A2O00624 439 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 KBTBD11O94819 623 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 REG1AP05451 166 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 CDK1P06493 297 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 ZNF735P0CB33 412 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 DEFA4P12838 97 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 HIST1H1BP16401 226 aaKnown RBP17.1■□□□□ 0.33
PTPRA-208ENST00000455631 ELLP55199 621 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-208ENST00000455631 TCTAP57738 103 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 RAB11BQ15907 218 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 PQLC1Q8N2U9 271 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 NANOGP1Q8N7R0 232 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 VSTM2AQ8TAG5 236 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 CXorf58Q96LI9 332 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 RARRES2Q99969 163 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 KCNK7Q9Y2U2 307 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 PRELID3BQ9Y3B1 194 aa17.1■□□□□ 0.33
PTPRA-208ENST00000455631 J3QRK9 145 aa17.09■□□□□ 0.33
PTPRA-208ENST00000455631 XRCC3O43542 346 aa17.09■□□□□ 0.33
PTPRA-208ENST00000455631 CLDN12P56749 244 aa17.09■□□□□ 0.33
PTPRA-208ENST00000455631 ARFRP1Q13795 201 aa17.09■□□□□ 0.33
PTPRA-208ENST00000455631 H1FOOQ8IZA3 346 aaPredicted RBP17.09■□□□□ 0.33
PTPRA-208ENST00000455631 OR2A7Q96R45 310 aa17.09■□□□□ 0.33
PTPRA-208ENST00000455631 GFI1Q99684 422 aa17.09■□□□□ 0.33
PTPRA-208ENST00000455631 C11orf68Q9H3H3 251 aaKnown RBP17.09■□□□□ 0.33
PTPRA-208ENST00000455631 MUC4Q99102 2169 aa17.08■□□□□ 0.33
PTPRA-208ENST00000455631 IGLV11-55A0A075B6I3 123 aa17.08■□□□□ 0.32
PTPRA-208ENST00000455631 UCHL1P09936 223 aa17.08■□□□□ 0.32
PTPRA-208ENST00000455631 PSMD7P51665 324 aa17.08■□□□□ 0.32
PTPRA-208ENST00000455631 LAMTOR1Q6IAA8 161 aa17.08■□□□□ 0.32
PTPRA-208ENST00000455631 PLET1Q6UQ28 207 aa17.08■□□□□ 0.32
PTPRA-208ENST00000455631 C6orf62Q9GZU0 229 aaPredicted RBP17.08■□□□□ 0.32
PTPRA-208ENST00000455631 OR4C46A6NHA9 309 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 IGLL5B9A064 214 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 CRHBPP24387 322 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 MAS1LP35410 378 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 ZNF645Q8N7E2 425 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 TMEM167AQ8TBQ9 72 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 CD300LFQ8TDQ1 290 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 RAB3CQ96E17 227 aa17.07■□□□□ 0.32
PTPRA-208ENST00000455631 AK6Q9Y3D8 172 aaKnown RBP17.07■□□□□ 0.32
PTPRA-208ENST00000455631 PKHD1P08F94 4074 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 A0A1B0GVY2 172 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 DENRO43583 198 aaKnown RBP17.06■□□□□ 0.32
PTPRA-208ENST00000455631 RPA2P15927 270 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 CD36P16671 472 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 RPL30P62888 115 aaKnown RBP17.06■□□□□ 0.32
PTPRA-208ENST00000455631 KLK9Q2XQG4 91 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 APRG1Q8IVJ8 170 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 OR11H2Q8NH07 326 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 OR4S2Q8NH73 311 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 ZNF502Q8TBZ5 544 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 TMEM190Q8WZ59 177 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 ZNF436Q9C0F3 470 aaPredicted RBP17.06■□□□□ 0.32
PTPRA-208ENST00000455631 CSTL1Q9H114 145 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 S100A14Q9HCY8 104 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 PSORS1C1Q9UIG5 152 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 KLK9Q9UKQ9 250 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 APLNQ9ULZ1 77 aa17.06■□□□□ 0.32
PTPRA-208ENST00000455631 A0A075B6Q4 140 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 MPTX1A8MV57 137 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 DEFB4AO15263 64 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 PLA2G7Q13093 441 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 C10orf67Q8IYJ2 551 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 PUSL1Q8N0Z8 303 aaKnown RBP17.05■□□□□ 0.32
PTPRA-208ENST00000455631 GVQW1Q8N7I0 195 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 FAM3DQ96BQ1 224 aa17.05■□□□□ 0.32
PTPRA-208ENST00000455631 DAZ1Q9NQZ3 744 aaKnown RBP17.05■□□□□ 0.32
PTPRA-208ENST00000455631 RAB27BO00194 218 aa17.04■□□□□ 0.32
PTPRA-208ENST00000455631 GNB3P16520 340 aa17.04■□□□□ 0.32
PTPRA-208ENST00000455631 MFAP2P55001 183 aa17.04■□□□□ 0.32
PTPRA-208ENST00000455631 C2orf76Q3KRA6 126 aa17.04■□□□□ 0.32
PTPRA-208ENST00000455631 RBMX2Q9Y388 322 aaKnown RBP17.04■□□□□ 0.32
PTPRA-208ENST00000455631 ABCA13Q86UQ4 5058 aa17.04■□□□□ 0.32
PTPRA-208ENST00000455631 RPL8P62917 257 aaKnown RBP17.03■□□□□ 0.32
PTPRA-208ENST00000455631 ZNF124Q15973 351 aa17.03■□□□□ 0.32
PTPRA-208ENST00000455631 LAIR2Q6ISS4 152 aa17.03■□□□□ 0.32
PTPRA-208ENST00000455631 SSX9Q7RTT3 188 aa17.03■□□□□ 0.32
PTPRA-208ENST00000455631 TCTEX1D2Q8WW35 142 aa17.03■□□□□ 0.32
PTPRA-208ENST00000455631 TMEM203Q969S6 136 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms