RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 ZNF818PQ6ZRF7 136 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 SLC25A42Q86VD7 318 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 CMTM3Q96MX0 182 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 GPHA2Q96T91 129 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 SLC5A7Q9GZV3 580 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 AKIP1Q9NQ31 210 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 IFT46Q9NQC8 304 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 BET1LQ9NYM9 111 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 KLK9Q9UKQ9 250 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 ZNF257Q9Y2Q1 563 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 SMAD5-AS1Q9Y6J3 95 aa9.21□□□□□ -0.94
USP40-210ENST00000454354 A0A1B0GW64 132 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 IL6RP08887 468 aaPredicted RBP9.2□□□□□ -0.94
USP40-210ENST00000454354 FGF2P09038 288 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 RPL27AP46776 148 aaKnown RBP9.2□□□□□ -0.94
USP40-210ENST00000454354 TAS2R31P59538 309 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 FXYD4P59646 89 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 NCS1P62166 190 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 POU2AF1Q16633 256 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 DHRS11Q6UWP2 260 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 IL34Q6ZMJ4 242 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 SPAG16Q8N0X2 631 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 OR9G4Q8NGQ1 327 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 OR4A5Q8NH83 315 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 BORCS5Q969J3 196 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 WWC2-AS2Q96NR7 200 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 AIFM2Q9BRQ8 373 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 SIGLEC8Q9NYZ4 499 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 EHFQ9NZC4 300 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
USP40-210ENST00000454354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
USP40-210ENST00000454354 HMX3A6NHT5 357 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 E7EUB6 86 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 BMPR1BO00238 502 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 HPRT1P00492 218 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 APOA1P02647 267 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 PRH1P02810 166 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 EIF4EP06730 217 aaKnown RBP9.19□□□□□ -0.94
USP40-210ENST00000454354 FCER2P06734 321 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 CRYGCP07315 174 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 GNRHRP30968 328 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 TAS2R46P59540 309 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 RPL8P62917 257 aaKnown RBP9.19□□□□□ -0.94
USP40-210ENST00000454354 EXOSC2Q13868 293 aaKnown RBP9.19□□□□□ -0.94
USP40-210ENST00000454354 RPEL1Q2QD12 228 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 OR4A47Q6IF82 309 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 TMEM17Q86X19 198 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 MOB3AQ96BX8 217 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 SLC2A9Q9NRM0 540 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 U3KQK5 164 aa9.19□□□□□ -0.94
USP40-210ENST00000454354 CGB1A6NKQ9 187 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 SULT1C2O00338 296 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 NQO2P16083 231 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 CTRB1P17538 263 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 HLA-GP17693 338 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 PRSS3P35030 304 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 RFX2P48378 723 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 HERV-K104P61576 105 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 VBP1P61758 197 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 ATP5G2Q06055 141 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 CTRB2Q6GPI1 263 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 SSX9Q7RTT3 188 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 HAPLN4Q86UW8 402 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 ANKRD13BQ86YJ7 626 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 CD300LFQ8TDQ1 290 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 GPX8Q8TED1 209 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 FYTTD1Q96QD9 318 aaKnown RBP9.18□□□□□ -0.94
USP40-210ENST00000454354 ZNF2Q9BSG1 426 aaPredicted RBP9.18□□□□□ -0.94
USP40-210ENST00000454354 RSRP1Q9BUV0 290 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 FXYD6Q9H0Q3 95 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 PLEKHA2Q9HB19 425 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 COMMD9Q9P000 198 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 COMMD3Q9UBI1 195 aa9.18□□□□□ -0.94
USP40-210ENST00000454354 OR2J3O76001 311 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 S1PR2O95136 353 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 GABARAPO95166 117 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 PMP2P02689 132 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 CSN3P07498 182 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 SMIM18P0DKX4 95 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 AREGP15514 252 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 PSMB6P28072 239 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 OR2B8PP59922 312 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 TATDN3Q17R31 274 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 AADACL3Q5VUY0 350 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 C19orf35Q6ZS72 473 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 LYSMD2Q8IV50 215 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 OR5H2Q8NGV7 314 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 OR51H1Q8NH63 302 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 SCPEP1Q9HB40 452 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 DMRT1Q9Y5R6 373 aa9.17□□□□□ -0.94
USP40-210ENST00000454354 IGLV11-55A0A075B6I3 123 aa9.16□□□□□ -0.94
USP40-210ENST00000454354 DPPA5A6NC42 116 aa9.16□□□□□ -0.94
USP40-210ENST00000454354 A8MZ25 164 aa9.16□□□□□ -0.94
USP40-210ENST00000454354 H0Y980 276 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms