RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TK1P04183 234 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 RD3LP0DJH9 198 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 FABP4P15090 132 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 S100GP29377 79 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 GNRHRP30968 328 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 IL2RGP31785 369 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 KIR2DS4P43632 304 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 SERF2P84101 59 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 HNF4GQ14541 408 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 KIR2DS1Q14954 304 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 CDPF1Q6NVV7 123 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 OR10A7Q8NGE5 316 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 MRPL30Q8TCC3 161 aaKnown RBP13.11□□□□□ -0.31
SNX17-204ENST00000453453 IGFBPL1Q8WX77 278 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
SNX17-204ENST00000453453 VAX2Q9UIW0 290 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
SNX17-204ENST00000453453 A0A1B0GV90 55 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 TMPRSS2O15393 492 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 LY6HO94772 140 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 LY86O95711 162 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 SSX2Q16385 188 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 CENPVQ7Z7K6 275 aaPredicted RBP13.1□□□□□ -0.31
SNX17-204ENST00000453453 GAPTQ8N292 157 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 SSX3Q99909 188 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 NDUFAF3Q9BU61 184 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 Q9N2K0 584 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 KCNIP1Q9NZI2 227 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 NAT8Q9UHE5 227 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 URGCP-MRPS24S4R325 110 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
SNX17-204ENST00000453453 NDUFB3O43676 98 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 PAX5Q02548 391 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 AESQ08117 197 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 ZNF787Q6DD87 383 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 FAM216BQ8N7L0 139 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 RHOVQ96L33 236 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 CABLES2Q9BTV7 478 aa13.1□□□□□ -0.31
SNX17-204ENST00000453453 PDLIM4P50479 330 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 CEBPGP53567 150 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 PAX9P55771 341 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 RAB11AP62491 216 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 ZNF124Q15973 351 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 LRRC10Q5BKY1 277 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 CXorf66Q5JRM2 361 aaPredicted RBP13.09□□□□□ -0.31
SNX17-204ENST00000453453 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 ZNF880Q6PDB4 577 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 TRAT1Q6PIZ9 186 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 CYP2G1PQ6ZSU1 146 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 OR1P1Q8NH06 330 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 SCGB1C1Q8TD33 95 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 COQ2Q96H96 371 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 KAAG1Q9UBP8 84 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
SNX17-204ENST00000453453 COL12A1Q99715 3063 aa13.08□□□□□ -0.31
SNX17-204ENST00000453453 DOPEY2Q9Y3R5 2298 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 NDUFS7O75251 213 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 SELLP14151 372 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 EPHA1P21709 976 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 OMGP23515 440 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
SNX17-204ENST00000453453 EDDM3BP56851 147 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 TMEM155Q4W5P6 130 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 LSM10Q969L4 123 aaKnown RBP13.08□□□□□ -0.32
SNX17-204ENST00000453453 GNG13Q9P2W3 67 aa13.08□□□□□ -0.32
SNX17-204ENST00000453453 SLC25A10Q9UBX3 287 aaPredicted RBP13.08□□□□□ -0.32
SNX17-204ENST00000453453 HELZ2Q9BYK8 2649 aaKnown RBP13.08□□□□□ -0.32
SNX17-204ENST00000453453 A8MWP6 167 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 CHST1O43916 411 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 CST7O76096 145 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 TMEM50AO95807 157 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 IGHV4-39P01824 125 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 NDUFB7P17568 137 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 MRPL52Q86TS9 123 aaKnown RBP13.07□□□□□ -0.32
SNX17-204ENST00000453453 LURAP1Q96LR2 239 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 NCOR1P1Q9H4R4 102 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 UTP20O75691 2785 aaKnown RBP13.07□□□□□ -0.32
SNX17-204ENST00000453453 LRBAP50851 2863 aa13.07□□□□□ -0.32
SNX17-204ENST00000453453 ODAMA1E959 279 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 PPP5D1E7EU14 171 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 TMEM250H0YL14 139 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 TNFRSF13BO14836 293 aaPredicted RBP13.06□□□□□ -0.32
SNX17-204ENST00000453453 PFN1P07737 140 aaKnown RBP13.06□□□□□ -0.32
SNX17-204ENST00000453453 ATP5J2P56134 94 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 FAM3BP58499 235 aaPredicted RBP13.06□□□□□ -0.32
SNX17-204ENST00000453453 RUNX1Q01196 453 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 ACOT6Q3I5F7 207 aaPredicted RBP13.06□□□□□ -0.32
SNX17-204ENST00000453453 TMEM41BQ5BJD5 291 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 SLC25A24Q6NUK1 477 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 Q6ZPA2 131 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 LILRB2Q8N423 598 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 OR4X1Q8NH49 305 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 RAB9BQ9NP90 201 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 MBNL3Q9NUK0 354 aaKnown RBP13.06□□□□□ -0.32
SNX17-204ENST00000453453 OR6C3Q9NZP0 311 aa13.06□□□□□ -0.32
SNX17-204ENST00000453453 USF3Q68DE3 2245 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms