RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FAM120AOSQ5T036 256 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 NPBQ8NG41 125 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TMEM167AQ8TBQ9 72 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 WDR89Q96FK6 387 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RITA1Q96K30 269 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SSX3Q99909 188 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TMEM160Q9NX00 188 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 KIAA1456Q9P272 454 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PRNDQ9UKY0 176 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TET2Q6N021 2002 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ACANP16112 2415 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RRHO14718 337 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 NBR2O15453 112 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SLC25A17O43808 307 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 KBTBD11O94819 623 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MPC2O95563 127 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MBPP02686 304 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 C1QBP02746 253 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TMEM11P17152 192 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 CD24P25063 80 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SRP14P37108 136 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RAB32Q13637 225 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ZFP69Q49AA0 526 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 CXorf66Q5JRM2 361 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ZNF429Q86V71 674 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FOXRED2Q8IWF2 684 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR52E5Q8NH55 327 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SIGLEC9Q9Y336 463 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 POMT1Q9Y6A1 747 aa10.04□□□□□ -0.8
HLA-DPA1-244ENST00000453337 NAV3Q8IVL0 2385 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 WRBO00258 174 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ACTL6BO94805 426 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 LY86O95711 162 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SCGB1D2O95969 90 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IFNA17P01571 189 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 CRYGBP07316 175 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 HNRNPCP07910 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SLC25A4P12235 298 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PVALBP20472 110 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MAS1LP35410 378 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 F2RL1P55085 397 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RPL8P62917 257 aaKnown RBP10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 CD300CQ08708 224 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PLGLAQ15195 96 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MMDQ15546 238 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 DEFB112Q30KQ8 113 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 LRRC37A5PQ49AS3 106 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 C11orf87Q6NUJ2 197 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MMD2Q8IY49 270 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 BCL6BQ8N143 479 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 Q8N6K4 173 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 HYLS1Q96M11 299 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TMEM14BQ9NUH8 114 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 METTL1Q9UBP6 276 aaKnown RBP10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 HSPB7Q9UBY9 170 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PITPNC1Q9UKF7 332 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FOXA2Q9Y261 457 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 NSG2Q9Y328 171 aa10.03□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TLN2Q9Y4G6 2542 aa10.02□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 C15orf61A6NNL5 157 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 NCBP2LA6PVI3 153 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 K7EPK0 472 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SYNGR2O43760 224 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 NDUFA3O95167 84 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 LY6G6DO95868 133 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 CNTFRP26992 372 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 S100A10P60903 97 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SPCS3P61009 180 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 HSPE1P61604 102 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TNFRSF9Q07011 255 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SCGB2A2Q13296 93 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PRSS8Q16651 343 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 NOXA1Q86UR1 476 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PPP1R27Q86WC6 154 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR5B3Q8NH48 314 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PIFOQ8TCI5 191 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RBMXL1Q96E39 390 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RAB40CQ96S21 281 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 RNF126Q9BV68 326 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 QTRT1Q9BXR0 403 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 COMMD5Q9GZQ3 224 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 PLSCR3Q9NRY6 295 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 LSM5Q9Y4Y9 91 aaKnown RBP10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 OR51B2Q9Y5P1 312 aa10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SOX21Q9Y651 276 aaPredicted RBP10.02□□□□□ -0.81
HLA-DPA1-244ENST00000453337 TRAV14DV4A0A0A6YYC5 116 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 BTBD17A6NE02 478 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 E5RGE8 158 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
HLA-DPA1-244ENST00000453337 L7N2F9 121 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms