RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 BLCAPP62952 87 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 DHRS2Q13268 280 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 TRIM16LQ309B1 348 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 C4orf46Q504U0 113 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 OR4A47Q6IF82 309 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 LIN54Q6MZP7 749 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 LYG2Q86SG7 212 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 VKORC1L1Q8N0U8 176 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 LGI3Q8N145 548 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 Q8N2B8 174 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 DMBX1Q8NFW5 382 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 OR4A5Q8NH83 315 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 TMEM167AQ8TBQ9 72 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 OR2A7Q96R45 310 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 PRSS22Q9GZN4 317 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 FBXL15Q9H469 300 aa9.19□□□□□ -0.94
SCN9A-204ENST00000452182 A0A0B4J2A0 478 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 INMT-MINDY4F8WBC2 141 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 PRAF2O60831 178 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 NDUFA7O95182 113 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 G6PCP35575 357 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 OXA1LQ15070 435 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 PLGLAQ15195 96 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 MRGPRG-AS1Q2M3A8 158 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 ZNF695Q8IW36 515 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 SELENOHQ8IZQ5 122 aaKnown RBP9.18□□□□□ -0.94
SCN9A-204ENST00000452182 TMEM140Q9NV12 185 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 SHPKQ9UHJ6 478 aa9.18□□□□□ -0.94
SCN9A-204ENST00000452182 DHFRP00374 187 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 IGHG2P01859 326 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 P0C879 139 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 SPNP16150 400 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 PRSS8Q16651 343 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 ANKRD55Q3KP44 614 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 TMEM268Q5VZI3 342 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 ZNF562Q6V9R5 426 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 Q6ZSV7 163 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 FAM219AQ8IW50 185 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 MMD2Q8IY49 270 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 LSM10Q969L4 123 aaKnown RBP9.17□□□□□ -0.94
SCN9A-204ENST00000452182 C16orf95Q9H693 158 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 ZNF702PQ9H963 129 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 MMP24Q9Y5R2 645 aa9.17□□□□□ -0.94
SCN9A-204ENST00000452182 UPK2O00526 184 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 FCN1O00602 326 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 KCNAB3O43448 404 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 IGKV1-5P01602 117 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 HKR1P10072 659 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 CD33P20138 364 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 VDAC1P21796 283 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 MAS1LP35410 378 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 AKR1C2P52895 323 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 RAB25P57735 213 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 SSX9Q7RTT3 188 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 H2BFWTQ7Z2G1 175 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 MINDY2Q8NBR6 621 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 COQ8AQ8NI60 647 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 ZNF431Q8TF32 576 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 RRNAD1Q96FB5 475 aaKnown RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 BEX1Q9HBH7 125 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 ZNF580Q9UK33 172 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 JMJD1CQ15652 2540 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 SNRPGP15A8MWD9 76 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 CA2P00918 260 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 RPL8P62917 257 aaKnown RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 CX3CL1P78423 397 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 SSBP2P81877 361 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 Q6ZS46 218 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 OR52B4Q8NGK2 314 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 PHB2Q99623 299 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 HSPB9Q9BQS6 159 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 GPN1Q9HCN4 374 aaPredicted RBP9.16□□□□□ -0.94
SCN9A-204ENST00000452182 PRR13Q9NZ81 148 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 TMED3Q9Y3Q3 217 aa9.16□□□□□ -0.94
SCN9A-204ENST00000452182 C2CD3Q4AC94 2353 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 SH2D7A6NKC9 451 aaPredicted RBP9.15□□□□□ -0.94
SCN9A-204ENST00000452182 DBX1A6NMT0 343 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 IGF1P05019 195 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 HLA-GP17693 338 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 RIPPLY3P57055 190 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 NMSQ5H8A3 153 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 SLC35E3Q7Z769 313 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 OR4F5Q8NH21 305 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 SEC22CQ9BRL7 303 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 OR51J1Q9H342 316 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 FKBP11Q9NYL4 201 aa9.15□□□□□ -0.94
SCN9A-204ENST00000452182 PRNDQ9UKY0 176 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms