RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZNF251Q9BRH9 671 aa17.04■□□□□ 0.32
C9orf3-208ENST00000451893 RDH8Q9NYR8 311 aa17.04■□□□□ 0.32
C9orf3-208ENST00000451893 TEX13DA0A0J9YY54 714 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-208ENST00000451893 YPEL1O60688 119 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 VAMP1P23763 118 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 GNRHRP30968 328 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 HOXD3P31249 432 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-208ENST00000451893 ZNF137PP52743 207 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 PIGPP57054 158 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 GNMTQ14749 295 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 Q8N6K4 173 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 OR52B4Q8NGK2 314 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 YPEL2Q96QA6 119 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 SLC2A9Q9NRM0 540 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 OR1A1Q9P1Q5 309 aa17.03■□□□□ 0.32
C9orf3-208ENST00000451893 LINC01548A6NM66 108 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 LIN54Q6MZP7 749 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 C18orf65Q6ZTR6 163 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 BVESQ8NE79 360 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 SECTM1Q8WVN6 248 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 NAA60Q9H7X0 242 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 KIAA1456Q9P272 454 aa17.02■□□□□ 0.32
C9orf3-208ENST00000451893 ZMAT5Q9UDW3 170 aaKnown RBP17.02■□□□□ 0.32
C9orf3-208ENST00000451893 PI3P19957 117 aa17.01■□□□□ 0.31
C9orf3-208ENST00000451893 SUPT4H1P63272 117 aaKnown RBP17.01■□□□□ 0.31
C9orf3-208ENST00000451893 C5orf24Q7Z6I8 188 aa17.01■□□□□ 0.31
C9orf3-208ENST00000451893 OR11H7Q8NGC8 314 aa17.01■□□□□ 0.31
C9orf3-208ENST00000451893 MGAT4CQ9UBM8 478 aa17.01■□□□□ 0.31
C9orf3-208ENST00000451893 RBM7Q9Y580 266 aaKnown RBP17.01■□□□□ 0.31
C9orf3-208ENST00000451893 MPPED1O15442 326 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 OR2A4O95047 310 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 RPLP1P05386 114 aaKnown RBP17■□□□□ 0.31
C9orf3-208ENST00000451893 ELANEP08246 267 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 F2RL1P55085 397 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 SRPXP78539 464 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 FOXE3Q13461 319 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 TMEM65Q6PI78 240 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 ETV3LQ6ZN32 361 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 OR8U1Q8NH10 309 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 DUX3Q96PT4 197 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 OR2A7Q96R45 310 aa17■□□□□ 0.31
C9orf3-208ENST00000451893 MRPL20Q9BYC9 149 aaKnown RBP17■□□□□ 0.31
C9orf3-208ENST00000451893 ZNF436Q9C0F3 470 aaPredicted RBP17■□□□□ 0.31
C9orf3-208ENST00000451893 IGKV1D-13A0A0B4J2D9 117 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 CCL24O00175 119 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 GIPP09681 153 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-208ENST00000451893 IGKV1-13P0DP09 117 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 PLGLAQ15195 96 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 FAM71E2Q8N5Q1 922 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 UXS1Q8NBZ7 420 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 HSPB9Q9BQS6 159 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 CCL28Q9NRJ3 127 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 PIPOXQ9P0Z9 390 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 GAB2Q9UQC2 676 aa16.99■□□□□ 0.31
C9orf3-208ENST00000451893 DBX1A6NMT0 343 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 OR8U9P0C7N5 309 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 CXCL3P19876 107 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 RAP2BP61225 183 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 PHLDA2Q53GA4 152 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 ZNF818PQ6ZRF7 136 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 LCNL1Q6ZST4 164 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 ZNF645Q8N7E2 425 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 LRTM2Q8N967 370 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 CASTOR1Q8WTX7 329 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 RANGRFQ9HD47 186 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-208ENST00000451893 PARP11Q9NR21 331 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 PLSCR3Q9NRY6 295 aa16.98■□□□□ 0.31
C9orf3-208ENST00000451893 SAA2-SAA4A0A096LPE2 208 aa16.97■□□□□ 0.31
C9orf3-208ENST00000451893 K7EIL1 84 aa16.97■□□□□ 0.31
C9orf3-208ENST00000451893 NBR2O15453 112 aa16.97■□□□□ 0.31
C9orf3-208ENST00000451893 SAA2P0DJI9 122 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-208ENST00000451893 TCTEX1D1Q8N7M0 179 aa16.97■□□□□ 0.31
C9orf3-208ENST00000451893 OR5M8Q8NGP6 311 aa16.97■□□□□ 0.31
C9orf3-208ENST00000451893 C3orf85A0A1B0GTC6 90 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 RAB29O14966 203 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 ST8SIA5O15466 376 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-208ENST00000451893 SNAPC5O75971 98 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 CYCSP99999 105 aaKnown RBP16.96■□□□□ 0.31
C9orf3-208ENST00000451893 DEFB136Q30KP8 78 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 LGI3Q8N145 548 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 ABHD5Q8WTS1 349 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 RBMXL1Q96E39 390 aaKnown RBP16.96■□□□□ 0.31
C9orf3-208ENST00000451893 RAX2Q96IS3 184 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 NABP2Q9BQ15 211 aa16.96■□□□□ 0.31
C9orf3-208ENST00000451893 H7C2Y5 167 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 GOSR2O14653 212 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 C1QBP02746 253 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 KRTAP10-11P60412 298 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 TMEM187Q14656 261 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 ZFP69Q49AA0 526 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 ZNF833PQ6ZTB9 187 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 TBC1D26Q86UD7 250 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-208ENST00000451893 FYTTD1Q96QD9 318 aaKnown RBP16.95■□□□□ 0.3
C9orf3-208ENST00000451893 P2RX4Q99571 388 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 FAM212BQ9NTI7 297 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-208ENST00000451893 WSB1Q9Y6I7 421 aa16.95■□□□□ 0.3
C9orf3-208ENST00000451893 DUXBA0A1W2PPF3 345 aa16.94■□□□□ 0.3
C9orf3-208ENST00000451893 WI2-2373I1.2A0A1W2PRP0 233 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms