RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	ELOVL1	Q9BW60	279 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	RANGRF	Q9HD47	186 aa	Predicted RBP	6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	DIABLO	Q9NR28	239 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	CCL28	Q9NRJ3	127 aa		6.65	□□□□□ -1.34
RFX3-209	ENST00000451859	NBEAL2	Q6ZNJ1	2754 aa		6.65	□□□□□ -1.35
RFX3-209	ENST00000451859	DNAH7	Q8WXX0	4024 aa		6.65	□□□□□ -1.35
RFX3-209	ENST00000451859	TENM3	Q9P273	2699 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	DPPA5	A6NC42	116 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	CREBL2	O60519	120 aa	Predicted RBP	6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	SLC22A5	O76082	557 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	MYOD1	P15172	320 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	RHOG	P84095	191 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	RPEL1	Q2QD12	228 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	TIMM50	Q3ZCQ8	353 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	SNAPC3	Q92966	411 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	TMEM68	Q96MH6	324 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	HSD17B10	Q99714	261 aa	Known RBP	6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	SPIN2A	Q99865	258 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	SPIN2B	Q9BPZ2	258 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	SLC5A7	Q9GZV3	580 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	AUNIP	Q9H7T9	357 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	VCX3A	Q9NNX9	186 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	AKIP1	Q9NQ31	210 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	IFT46	Q9NQC8	304 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	PEF1	Q9UBV8	284 aa	Known RBP	6.64	□□□□□ -1.35
RFX3-209	ENST00000451859		S4R3C0	116 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859	STAB2	Q8WWQ8	2551 aa		6.64	□□□□□ -1.35
RFX3-209	ENST00000451859		A0A087WXM4	84 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	SULT1C2	O00338	296 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	OR2J3	O76001	311 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	KBTBD11	O94819	623 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	OR2A4	O95047	310 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	PPY	P01298	95 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	IGHV3-23	P01764	117 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	REG1A	P05451	166 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	FRMD6-AS1	P0C7T7	363 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	NHLRC4	P0CG21	123 aa	Predicted RBP	6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	RPA2	P15927	270 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	RPS19	P39019	145 aa	Known RBP	6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	RPL27A	P46776	148 aa	Known RBP	6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	SCAND1	P57086	179 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	HERV-K104	P61576	105 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF45	Q02386	682 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	ATP5G2	Q06055	141 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	UBE2NL	Q5JXB2	153 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF343	Q6P1L6	599 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF66	Q6ZN08	573 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	HOGA1	Q86XE5	327 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	SPAG16	Q8N0X2	631 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	MFSD4A	Q8N468	514 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	SAMD12	Q8N8I0	201 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	TSPAN14	Q8NG11	270 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	OR9G4	Q8NGQ1	327 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	OR51H1	Q8NH63	302 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	USMG5	Q96IX5	58 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	OR2A7	Q96R45	310 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	HRASLS	Q9HDD0	168 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859	EHF	Q9NZC4	300 aa		6.63	□□□□□ -1.35
RFX3-209	ENST00000451859		A0A0A6YYH2	397 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859		A6NJ64	397 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	FAM223B	A6NKX1	122 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	PPP5D1	E7EU14	171 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859		E7EUB6	86 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	TNFAIP8	O95379	198 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	IGLV1-51	P01701	117 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	PMP2	P02689	132 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	AREG	P15514	252 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	BRWD1-AS2	P59051	145 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	TAS2R20	P59543	309 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	EIF4EBP1	Q13541	118 aa	Predicted RBP	6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	KLF5	Q13887	457 aa	Predicted RBP	6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	TMEM69	Q5SWH9	247 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	LCE5A	Q5TCM9	118 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	AADACL3	Q5VUY0	350 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	SBSPON	Q8IVN8	264 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	FAM223A	Q8IWN6	122 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	VSTM2A	Q8TAG5	236 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	YIPF6	Q96EC8	236 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	S100A16	Q96FQ6	103 aa	Known RBP	6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	RCHY1	Q96PM5	261 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	SELENOK	Q9Y6D0	94 aa		6.62	□□□□□ -1.35
RFX3-209	ENST00000451859	RYR3	Q15413	4870 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	TEX22	C9J3V5	150 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	BMPR1B	O00238	502 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	XRCC3	O43542	346 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	HRAS	P01112	189 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	HLA-A	P01891	365 aa	Known RBP	6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	IL6R	P08887	468 aa	Predicted RBP	6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	EDN2	P20800	178 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	KIR2DS2	P43631	304 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	CBX5	P45973	191 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	NCS1	P62166	190 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	CATR1	Q13166	79 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	TATDN3	Q17R31	274 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	C15orf32	Q32M92	178 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	OR4A47	Q6IF82	309 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF818P	Q6ZRF7	136 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	SLC25A42	Q86VD7	318 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	CROCCP3	Q8IVE0	287 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	PUSL1	Q8N0Z8	303 aa	Known RBP	6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms