RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 A0A1W2PRX2 142 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 TNFSF12O43508 249 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 IGLV2-14P01704 120 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 APOA2P02652 100 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 AMY1AP04745 511 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 SNRNP70P08621 437 aaKnown RBP13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 RRASP10301 218 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 AKR1C4P17516 323 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 HLA-GP17693 338 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 PI3P19957 117 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 MC5RP33032 325 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 DUTP33316 252 aaKnown RBP13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 KIR2DS2P43631 304 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 REG1BP48304 166 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 PPP1R1AQ13522 171 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 LGALSLQ3ZCW2 172 aaPredicted RBP13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 TMEM128Q5BJH2 165 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 CENPVQ7Z7K6 275 aaPredicted RBP13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 SLC7A5P1Q8MH63 180 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 TCTEX1D1Q8N7M0 179 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 OR5AU1Q8NGC0 362 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 TCTEX1D2Q8WW35 142 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 SHPKQ9UHJ6 478 aa13.53□□□□□ -0.24
PRPF40A-204ENST00000450303 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 A0A1W2PPI3 338 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 ADARB2-AS1A8MUL3 147 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 G3V4G9 280 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 MPPED1O15442 326 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 PROP1O75360 226 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 B3GALNT1O75752 331 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 SIX6O95475 246 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 OPN1MWP04001 364 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 OPN1MW2P0DN77 364 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 OPN1MW3P0DN78 364 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 HTR2BP41595 481 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 RAB14P61106 215 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 CYCSP99999 105 aaKnown RBP13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 HES1Q14469 280 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 HNF4GQ14541 408 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 OPCMLQ14982 345 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 R3HDM4Q96D70 268 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 NABP2Q9BQ15 211 aa13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 MRPL20Q9BYC9 149 aaKnown RBP13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
PRPF40A-204ENST00000450303 FAM90A9PA6NNJ1 464 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 CT45A6P0DMU7 189 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 CT45A5P0DMU8 189 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 CT45A7P0DMV0 189 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 F2RP25116 425 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 CD1BP29016 333 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 H2BFSP57053 126 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 RTL8BQ17RB0 113 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 GSG1LQ6UXU4 331 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 NDUFA11Q86Y39 141 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 ADAD2Q8NCV1 583 aaKnown RBP13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 CASTOR1Q8WTX7 329 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 C5orf30Q96GV9 206 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 SLC35D1Q9NTN3 355 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 UBQLN2Q9UHD9 624 aa13.51□□□□□ -0.25
PRPF40A-204ENST00000450303 IGHV3-72A0A0B4J1Y9 119 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 C3orf85A0A1B0GTC6 90 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 H7C2Y5 167 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 SFT2D2O95562 160 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 TMEM11P17152 192 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 EIF4EBP1Q13541 118 aaPredicted RBP13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 TEX261Q6UWH6 196 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 PDPNQ86YL7 162 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 OR5AN1Q8NGI8 311 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 NAA60Q9H7X0 242 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 FAM212BQ9NTI7 297 aaPredicted RBP13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 MOB4Q9Y3A3 225 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 WASHC3Q9Y3C0 194 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 U3KQ87 197 aa13.5□□□□□ -0.25
PRPF40A-204ENST00000450303 PIGBOS1A0A0B4J2F0 54 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 A0A0D9SG52 128 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 C5orf51A6NDU8 294 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 LINC00473A8K010 186 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 FAM25EA8MYX2 175 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 G3V3Q6 166 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 S100A11P31949 105 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 TCTEX1D4Q5JR98 221 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 ZNF383Q8NA42 475 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 THAP6Q8TBB0 222 aa13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 RBMXL1Q96E39 390 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-204ENST00000450303 TCRBV4S1A1TA0A5B7 111 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 H0Y980 276 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 H0YJW9 148 aa13.48□□□□□ -0.25
PRPF40A-204ENST00000450303 ARPC5O15511 151 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms