RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 EIF4E3Q8N5X7 224 aaKnown RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 CITED1Q99966 193 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 PAM16Q9Y3D7 125 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 USF3Q68DE3 2245 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 C9JQL5 133 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 TRGC1P0CF51 173 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 HTR1DP28221 377 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 CCKARP32238 428 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 LHX2P50458 406 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 RTP5Q14D33 572 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 GFI1BQ5VTD9 330 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 GCSAMQ8N6F7 178 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 RCC1LQ96I51 464 aaKnown RBP6.06□□□□□ -1.44
BEST1-202ENST00000449131 ZNF714Q96N38 554 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 DCTN5Q9BTE1 182 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 ASCL3Q9NQ33 180 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 IL19Q9UHD0 177 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 TCF19Q9Y242 345 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 LRRC3CA6NJW4 275 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 C9orf172C9J069 976 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 GNG7O60262 68 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 PLAUP00749 431 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 CECR9P0C854 216 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 FCER1GP30273 86 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 CLDN18P56856 261 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 HSPE1P61604 102 aaKnown RBP6.06□□□□□ -1.44
BEST1-202ENST00000449131 SUPT4H1P63272 117 aaKnown RBP6.06□□□□□ -1.44
BEST1-202ENST00000449131 TMEM183BQ1AE95 376 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 NRN1LQ496H8 165 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 KHDC1LQ5JSQ8 128 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 P2RX4Q99571 388 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 THYN1Q9P016 225 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 TCAPO15273 167 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 MPZP25189 248 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 MMDQ15546 238 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 VAMP3Q15836 100 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 SLC35E4Q6ICL7 350 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 OR8B3Q8NGG8 313 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 PRSS3P2Q8NHM4 247 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 OR8B2Q96RD0 313 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 ATG101Q9BSB4 218 aa6.06□□□□□ -1.44
BEST1-202ENST00000449131 CISD1Q9NZ45 108 aaKnown RBP6.06□□□□□ -1.44
BEST1-202ENST00000449131 C17orf98A8MV24 154 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 J3QW42 95 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 OR4A8P0C604 315 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 ZNF883P0CG24 379 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 CRYGSP22914 178 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 COL8A1P27658 744 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 CSRP2Q16527 193 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 FAM201AQ5SY85 155 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 HCP5Q6MZN7 132 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 OR5AU1Q8NGC0 362 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 NABP1Q96AH0 204 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 RASL11BQ9BPW5 248 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 PARLQ9H300 379 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 DENND4CQ5VZ89 1909 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 CEACAM18A8MTB9 384 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 F8VVB4 439 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 F8VWA3 439 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 LINC00869P0C866 280 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 RPL39P5Q59GN2 51 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 IGF2-ASQ6U949 168 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 PLPPR1Q8TBJ4 325 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 PERPQ96FX8 193 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 PAXXQ9BUH6 204 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 JPT1Q9UK76 154 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 KLF2Q9Y5W3 355 aaPredicted RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 SPG11Q96JI7 2443 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 NTN3O00634 580 aaPredicted RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 P01737 135 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 IGHV1-2P23083 117 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 S100A4P26447 101 aaKnown RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 TNFSF10P50591 281 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 RPL8P62917 257 aaKnown RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 KRTCAP3Q53RY4 240 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 ZNF506Q5JVG8 444 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 ACP7Q6ZNF0 438 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 ASCL5Q7RTU5 278 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 LHFPL1Q86WI0 220 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 OR2D3Q8NGH3 330 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 FAM222BQ8WU58 562 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 QTRT1Q9BXR0 403 aaKnown RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 WFDC1Q9HC57 220 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 MRPS18CQ9Y3D5 142 aaKnown RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 LOC102724200A0A096LPH7 203 aaPredicted RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 ZNF729A6NN14 1252 aaPredicted RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 NEURL1O76050 574 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 IGHV3-48P01763 117 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 TFF1P04155 84 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 ZNF25P17030 456 aaPredicted RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 RPL27AP46776 148 aaKnown RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 MFAP2P55001 183 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 TCTAP57738 103 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 HIST3H3Q16695 136 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 COX19Q49B96 90 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 TMEM105Q8N8V8 129 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 OR13A1Q8NGR1 328 aa6.05□□□□□ -1.44
BEST1-202ENST00000449131 PSMG3Q9BT73 122 aaPredicted RBP6.05□□□□□ -1.44
BEST1-202ENST00000449131 ELOVL1Q9BW60 279 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms