RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	VENTX	O95231	258 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	TIMP3	P35625	211 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	PYY3	Q5JQD4	70 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	FAM201A	Q5SY85	155 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	GFI1B	Q5VTD9	330 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	VHLL	Q6RSH7	139 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	SDSL	Q96GA7	329 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	RAB9B	Q9NP90	201 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	TCF19	Q9Y242	345 aa		13.96	□□□□□ -0.17
TOM1-210	ENST00000449058	TRAV38-1	A0A0B4J264	116 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	C11orf94	C9JXX5	98 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058		H7BYZ3	331 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	IGHV2-70	P01814	119 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	LEAP2	Q969E1	77 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	CAD	P27708	2225 aa		13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.96	□□□□□ -0.18
TOM1-210	ENST00000449058	GYPA	P02724	150 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	TGIF2LY	Q8IUE0	185 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	MGST2	Q99735	147 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	GPR61	Q9BZJ8	451 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	MS4A5	Q9H3V2	200 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	RNF7	Q9UBF6	113 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	SAA2-SAA4	A0A096LPE2	208 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	C15orf61	A6NNL5	157 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	SAA2	P0DJI9	122 aa	Predicted RBP	13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	GALR1	P47211	349 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	STUM	Q69YW2	141 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	ABHD12	Q8N2K0	398 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	ANAPC16	Q96DE5	110 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	GGTLC1	Q9BX51	225 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	GCM1	Q9NP62	436 aa		13.95	□□□□□ -0.18
TOM1-210	ENST00000449058	PDE6D	O43924	150 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	C4orf17	Q53FE4	359 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	OR4X1	Q8NH49	305 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	EP300	Q09472	2414 aa	Predicted RBP	13.94	□□□□□ -0.18
TOM1-210	ENST00000449058		A0A1W2PPV4	95 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	THBS3	P49746	956 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	RTP5	Q14D33	572 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	TCF23	Q7RTU1	214 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	NECAP1	Q8NC96	275 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	ZNF439	Q8NDP4	499 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	C1orf159	Q96HA4	380 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	OR5B12	Q96R08	314 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	SFXN3	Q9BWM7	321 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	IL19	Q9UHD0	177 aa		13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	FOXA2	Q9Y261	457 aa	Predicted RBP	13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	LSM4	Q9Y4Z0	139 aa	Known RBP	13.94	□□□□□ -0.18
TOM1-210	ENST00000449058	HRAS	P01112	189 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	IGHV1-46	P01743	117 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	CEACAM8	P31997	349 aa	Predicted RBP	13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	OR10D4P	Q8NGN7	298 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	RHOV	Q96L33	236 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	GAFA1	Q96PS6	74 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	LINC00574	Q9H8X3	128 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	KCNIP2	Q9NS61	270 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	TMEM14B	Q9NUH8	114 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	PXMP4	Q9Y6I8	212 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	CFAP47	Q6ZTR5	3102 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	NBEA	Q8NFP9	2946 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	TRGV10	A0A0A0MS01	117 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	GNB1	P62873	340 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	TNFAIP6	P98066	277 aa	Predicted RBP	13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	OR4A47	Q6IF82	309 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	ZNF383	Q8NA42	475 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	ELOVL1	Q9BW60	279 aa		13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	PATZ1	Q9HBE1	687 aa	Known RBP	13.93	□□□□□ -0.18
TOM1-210	ENST00000449058	TMPRSS2	O15393	492 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	ATP5G3	P48201	142 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	C22orf34	Q6ZV56	151 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	ADTRP	Q96IZ2	230 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	PITPNC1	Q9UKF7	332 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	DMRT1	Q9Y5R6	373 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	ZNF318	Q5VUA4	2279 aa		13.92	□□□□□ -0.18
TOM1-210	ENST00000449058	STAG3L2	P0CL84	134 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	STAG3L3	P0CL85	134 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	HSPE1	P61604	102 aa	Known RBP	13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	MRPS11	P82912	194 aa	Known RBP	13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	POU2AF1	Q16633	256 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	PDZD11	Q5EBL8	140 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	MIC13	Q5XKP0	118 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	NPVF	Q9HCQ7	196 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058		F6UZH7	168 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	GGCT	O75223	188 aa	Known RBP	13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	SELENOV	P59797	346 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	UBE2G2	P60604	165 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	ZNF788	Q6ZQV5	615 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	LINC01551	Q86U37	167 aa		13.91	□□□□□ -0.18
TOM1-210	ENST00000449058	CRYAB	P02511	175 aa	Known RBP	13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	ARL14EPL	P0DKL9	152 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	SRP14	P37108	136 aa	Known RBP	13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	FAM27E3	Q08E93	113 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	LYG1	Q8N1E2	194 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	CORO2A	Q92828	525 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	TXNDC17	Q9BRA2	123 aa		13.9	□□□□□ -0.18
TOM1-210	ENST00000449058	IDI2-AS1	Q9NZ38	188 aa		13.9	□□□□□ -0.18

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