RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HRASP01112 189 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 CD3DP04234 171 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 APELAP0DMC3 54 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 TBPP20226 339 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 GNRHRP30968 328 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 MYCNOSP40205 109 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 RAB9AP51151 201 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 TPPP2P59282 170 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 TAS2R19P59542 299 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 PHLDA2Q53GA4 152 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 C11orf87Q6NUJ2 197 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
USP39-206ENST00000448971 MMD2Q8IY49 270 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
USP39-206ENST00000448971 RHOVQ96L33 236 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 TINAGL1Q9GZM7 467 aaPredicted RBP11.34□□□□□ -0.59
USP39-206ENST00000448971 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
USP39-206ENST00000448971 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 VSIG4Q9Y279 399 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 RBFOX2O43251 390 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP39-206ENST00000448971 OR2A4O95047 310 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 PPP5CP53041 499 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 BRWD1-AS2P59051 145 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 C10orf55Q5SWW7 151 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 LPCAT3Q6P1A2 487 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 SLC38A6Q8IZM9 456 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 ZNF491Q8N8L2 437 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 CD300LFQ8TDQ1 290 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 RAX2Q96IS3 184 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 UBE2E2Q96LR5 201 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 MS4A10Q96PG2 267 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 OR2A7Q96R45 310 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 HRASLSQ9HDD0 168 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 COA4Q9NYJ1 87 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.6
USP39-206ENST00000448971 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.6
USP39-206ENST00000448971 CCL24O00175 119 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 PGLYRP1O75594 196 aaPredicted RBP11.32□□□□□ -0.6
USP39-206ENST00000448971 S1PR2O95136 353 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 HPRT1P00492 218 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 TRGV3P03979 118 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 PGAM2P15259 253 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 TAS2R31P59538 309 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 ERVK-16P61578 105 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 SCGB2B2Q4G0G5 96 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 PUSL1Q8N0Z8 303 aaKnown RBP11.32□□□□□ -0.6
USP39-206ENST00000448971 ARRDC1Q8N5I2 433 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 TMEM229BQ8NBD8 167 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 OR5T1Q8NG75 326 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
USP39-206ENST00000448971 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 AIFM2Q9BRQ8 373 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 SLA2Q9H6Q3 261 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 COMMD9Q9P000 198 aa11.32□□□□□ -0.6
USP39-206ENST00000448971 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 H3BUA1 57 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 RAB3DO95716 219 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 NQO2P16083 231 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 S100A5P33763 92 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 SSBP1Q04837 148 aaKnown RBP11.31□□□□□ -0.6
USP39-206ENST00000448971 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 STEAP1BQ6NZ63 245 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 OR11H1Q8NG94 326 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 P2RX4Q99571 388 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
USP39-206ENST00000448971 NXF2Q9GZY0 626 aaKnown RBP11.31□□□□□ -0.6
USP39-206ENST00000448971 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 FABP12A6NFH5 140 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 CTDSPLO15194 276 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 DUS4LO95620 317 aaKnown RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 RPA2P15927 270 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 F2RP25116 425 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 TNFSF8P32971 234 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 RPL27AP46776 148 aaKnown RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 RPL8P62917 257 aaKnown RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 FAAP20Q6NZ36 180 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 TBC1D26Q86UD7 250 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 OR4D10Q8NGI6 311 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 OR4A5Q8NH83 315 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 DPF1Q92782 380 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 FYTTD1Q96QD9 318 aaKnown RBP11.3□□□□□ -0.6
USP39-206ENST00000448971 RSRP1Q9BUV0 290 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 PLEKHA2Q9HB19 425 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 BET1LQ9NYM9 111 aa11.3□□□□□ -0.6
USP39-206ENST00000448971 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms