RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 UBTD1Q9HAC8 227 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 PATZ1Q9HBE1 687 aaKnown RBP8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 FKBP11Q9NYL4 201 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 PRNDQ9UKY0 176 aa8.63□□□□□ -1.03
VIPAS39-203ENST00000448935 C15orf61A6NNL5 157 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 MC5RP33032 325 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 GNB2P62879 340 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 SLC38A11Q08AI6 406 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM177Q53S58 311 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 PUSL1Q8N0Z8 303 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 ZNF525Q8N782 197 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 OR5AN1Q8NGI8 311 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 OR13D1Q8NGV5 346 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 VSTM2AQ8TAG5 236 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 PSMG3Q9BT73 122 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 HRH4Q9H3N8 390 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 ENY2Q9NPA8 101 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 FOXA2Q9Y261 457 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 AMMECR1Q9Y4X0 333 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 DOCK11Q5JSL3 2073 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 HIVEP3Q5T1R4 2406 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 H7C2Y5 167 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 TSPAN15O95858 294 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 GPR6P46095 362 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 EFNA4P52798 201 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 OR2B8PP59922 312 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 ERVFRD-1P60508 538 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 AKR1C8PQ5T2L2 129 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 OR4A47Q6IF82 309 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 BTNL8Q6UX41 500 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM182Q6ZP80 229 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 TGIF2LXQ8IUE1 241 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 LY6G5BQ8NDX9 201 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 LFNGQ8NES3 379 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 OR4C13Q8NGP0 309 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 LYPD6BQ8NI32 183 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 FLYWCH2Q96CP2 140 aaKnown RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM147Q9BVK8 224 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 CLEC7AQ9BXN2 247 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 HEYLQ9NQ87 328 aaPredicted RBP8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 BET1LQ9NYM9 111 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 ZNF257Q9Y2Q1 563 aa8.62□□□□□ -1.03
VIPAS39-203ENST00000448935 H0YJW9 148 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 C19orf84I3L1E1 186 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 ATP5IP56385 69 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 RAB2AP61019 212 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 HSPE1P61604 102 aaKnown RBP8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 RAB11AP62491 216 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 SERF2P84101 59 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 ZNF616Q08AN1 781 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 LRRC75BQ2VPJ9 315 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 OR8G2PQ6IF36 304 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 C11orf42Q8N5U0 333 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 BEND2Q8NDZ0 799 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 SVIPQ8NHG7 77 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 LHX4Q969G2 390 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 ST6GALNAC6Q969X2 333 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 NABP2Q9BQ15 211 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 MRPL20Q9BYC9 149 aaKnown RBP8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 TMEM14BQ9NUH8 114 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 WASHC3Q9Y3C0 194 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 TIMM9Q9Y5J7 89 aa8.61□□□□□ -1.03
VIPAS39-203ENST00000448935 IGHV2-26A0A0B4J1V2 119 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 BTBD17A6NE02 478 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 M0R1W7 72 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 UPK2O00526 184 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 IFNA10P01566 189 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 ARG1P05089 322 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 IL6RP08887 468 aaPredicted RBP8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 HOXA1P49639 335 aaPredicted RBP8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 TLE4Q04727 773 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 HLA-DRB5Q30154 266 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 HAPLN4Q86UW8 402 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 VKORC1L1Q8N0U8 176 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 OR4C12Q96R67 309 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 GGACTQ9BVM4 153 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 WDR61Q9GZS3 305 aaKnown RBP8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 UQCC1Q9NVA1 299 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 TCF19Q9Y242 345 aa8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 KLF2Q9Y5W3 355 aaPredicted RBP8.6□□□□□ -1.03
VIPAS39-203ENST00000448935 LOC105371242A0A075B767 164 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 A0A1W2PPR1 153 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 SOX15O60248 233 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 LY6HO94772 140 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 KBTBD11O94819 623 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 IGLV1-47P01700 117 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 HBE1P02100 147 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 USF1P22415 310 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 CDKN1AP38936 164 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 ARL16Q0P5N6 197 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 OR5B3Q8NH48 314 aa8.59□□□□□ -1.03
VIPAS39-203ENST00000448935 FAM213BQ8TBF2 198 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms