RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 SUB1P53999 127 aaKnown RBP eCLIP3.02□□□□□ -1.935e-6■■■■■ 28.3
VPS29-202ENST00000447578 CLDN18P56856 261 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 TAS2R31P59538 309 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ARPC4P59998 168 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 UBA52P62987 128 aaKnown RBP3.02□□□□□ -1.93
VPS29-202ENST00000447578 EGFEM1PQ0D2K5 195 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SLC9A3R2Q15599 337 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 KISS1Q15726 138 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 STK11Q15831 433 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 VAX1Q5SQQ9 334 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 C10orf128Q5T292 105 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZNF660Q6AZW8 331 aaPredicted RBP3.02□□□□□ -1.93
VPS29-202ENST00000447578 LPCAT3Q6P1A2 487 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 AAED1Q7RTV5 226 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SLC51BQ86UW2 128 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 PDZD9Q8IXQ8 264 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 KCNRGQ8N5I3 272 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZNF525Q8N782 197 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 C8orf31Q8N9H6 132 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZIC4Q8N9L1 334 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.02□□□□□ -1.93
VPS29-202ENST00000447578 OR6K3Q8NGY3 331 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 OR52E5Q8NH55 327 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 CT55Q8WUE5 264 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 MITD1Q8WV92 249 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SPTSSAQ969W0 71 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 MARC2Q969Z3 335 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 MRGPRFQ96AM1 343 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZNF799Q96GE5 643 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ARHGAP5-AS1Q96IT6 56 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SCGB3A2Q96PL1 93 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 S100A13Q99584 98 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 C1QTNF6Q9BXI9 259 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 PECRQ9BY49 303 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 CST11Q9H112 138 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SH2D2AQ9NP31 389 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ZC4H2Q9NQZ6 224 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 SDHAF2Q9NX18 166 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 Q9UF83 564 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 ANAPC10Q9UM13 185 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 V9GYS6 101 aa3.02□□□□□ -1.93
VPS29-202ENST00000447578 CPAMD8Q8IZJ3 1885 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 CEP350Q5VT06 3117 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 PDE4DIPQ5VU43 2346 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 A0A1B0GW55 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 A0A1W2PRD5 423 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 PINLYPA6NC86 204 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 SDCBPO00560 298 aaPredicted RBP3.01□□□□□ -1.93
VPS29-202ENST00000447578 BCL2L11O43521 198 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 SGCEO43556 437 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 SFT2D2O95562 160 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 HLA-HP01893 362 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L2P0CJ85 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L3P0CJ86 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L4P0CJ87 422 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L5P0CJ88 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L6P0CJ89 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DUX4L7P0CJ90 424 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DNAH10OSP0CZ25 163 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 ICAM2P13598 275 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 ZNF32P17041 273 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 HLA-GP17693 338 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 CNR1P21554 472 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 GABRR1P24046 479 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TAS2R46P59540 309 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 HIST1H3AP68431 136 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 ZNF92Q03936 586 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 BAMBIQ13145 260 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 EIF3IQ13347 325 aaKnown RBP3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR2F1Q13607 317 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 RSPO1Q2MKA7 263 aaPredicted RBP3.01□□□□□ -1.93
VPS29-202ENST00000447578 CEACAM16Q2WEN9 425 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 CHRFAM7AQ494W8 412 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 FAM74A1Q5RGS3 127 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 HIST2H3PS2Q5TEC6 136 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 FAM27BQ5VT28 67 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DRAM2Q6UX65 266 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 HIST2H3AQ71DI3 136 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 ARRDC1Q8N5I2 433 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 NKAPP1Q8N9T2 125 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 INO80EQ8NBZ0 244 aaPredicted RBP3.01□□□□□ -1.93
VPS29-202ENST00000447578 CCDC54Q8NEL0 328 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 PXT1Q8NFP0 134 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR13G1Q8NGZ3 307 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR10D3Q8NH80 312 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR1S1Q8NH92 325 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR2AE1Q8NHA4 323 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 OR2V1Q8NHB1 315 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TERB2Q8NHR7 220 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 PPP1R1CQ8WVI7 109 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 PP6455Q8WZ26 134 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 MAFIPQ8WZ33 124 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 DCUN1D4Q92564 292 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 RAB1CQ92928 201 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TCEAL3Q969E4 200 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 TMEM230Q96A57 120 aa3.01□□□□□ -1.93
VPS29-202ENST00000447578 REEP6Q96HR9 211 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms