RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 AGFG2O95081 481 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 SELLP14151 372 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 HOXC12P31275 282 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 ERVFC1-1P60608 527 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 OR10G8Q8NGN5 311 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 OCC1Q8TAD7 63 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 MSL2Q9HCI7 577 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 NPVFQ9HCQ7 196 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 GNG12Q9UBI6 72 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 KIR2DL5BA0A0G2JN68 375 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 KIR2DL5BA0A0G2JPC4 375 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 M0R1X1 148 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 KIR2DS2P43631 304 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 MBNL2Q5VZF2 373 aaKnown RBP15.79■□□□□ 0.12
SDCBP-204ENST00000447182 KIR2DL5AQ8N109 375 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 LRRC29Q8WV35 223 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 C1orf159Q96HA4 380 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 NAGKQ9UJ70 344 aa15.79■□□□□ 0.12
SDCBP-204ENST00000447182 SCGB1D1O95968 90 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 ADMP35318 185 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 NUTF2P61970 127 aaKnown RBP15.78■□□□□ 0.12
SDCBP-204ENST00000447182 MZT1Q08AG7 82 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 EDDM3AQ14507 147 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 LTC4SQ16873 150 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 SDSLQ96GA7 329 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 ARRDC1-AS1Q9H2J1 176 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 LY96Q9Y6Y9 160 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 TET2Q6N021 2002 aaPredicted RBP15.78■□□□□ 0.12
SDCBP-204ENST00000447182 KNTC1P50748 2209 aa15.78■□□□□ 0.12
SDCBP-204ENST00000447182 F2RL2O00254 374 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 NUPR1O60356 82 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 IGHG3P01860 377 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 CECR9P0C854 216 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 GCHFRP30047 84 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 OR10J1P30954 320 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 FABP6P51161 128 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 TGIF2LXQ8IUE1 241 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 ABHD12Q8N2K0 398 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 C11orf52Q96A22 123 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 WFIKKN1Q96NZ8 548 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 MS4A10Q96PG2 267 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 TMEM140Q9NV12 185 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 TCF19Q9Y242 345 aa15.77■□□□□ 0.12
SDCBP-204ENST00000447182 POLR3KQ9Y2Y1 108 aaPredicted RBP15.77■□□□□ 0.12
SDCBP-204ENST00000447182 YTHDF2Q9Y5A9 579 aaKnown RBP15.77■□□□□ 0.12
SDCBP-204ENST00000447182 LNP1A1A4G5 178 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 AQP7O14520 342 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 EREGO14944 169 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 LOXL3P58215 753 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 TCF23Q7RTU1 214 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 VKORC1L1Q8N0U8 176 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 S1PR3Q99500 378 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 NEU1Q99519 415 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 IFI27L2Q9H2X8 130 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 IL36BQ9NZH7 164 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 FZR1Q9UM11 496 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 ZDBF2Q9HCK1 2354 aa15.77■□□□□ 0.11
SDCBP-204ENST00000447182 IGKV1D-17A0A075B6S4 117 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 TRAV3A0A0B4J244 114 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 A0A1B0GUS0 222 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 SRRM5B3KS81 715 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 C9JCJ5 164 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 MGST3O14880 152 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 IGLV1-44P01699 117 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 IL6RP08887 468 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-204ENST00000447182 ESDP10768 282 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 RHOBP62745 196 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 EFNB3Q15768 340 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 C1orf174Q8IYL3 243 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 DDB2Q92466 427 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 TRIB1Q96RU8 372 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 CD59P13987 128 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 RPL31P62899 125 aaKnown RBP15.76■□□□□ 0.11
SDCBP-204ENST00000447182 RPL39P5Q59GN2 51 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 TEPPQ6URK8 271 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 PPP1R35Q8TAP8 253 aa15.76■□□□□ 0.11
SDCBP-204ENST00000447182 OPN3Q9H1Y3 402 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-204ENST00000447182 TNRC18O15417 2968 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-204ENST00000447182 C15orf61A6NNL5 157 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 ITGB1BP1O14713 200 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 MT-CO2P00403 227 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 FOSL1P15407 271 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 KIR2DL2P43627 348 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-204ENST00000447182 RPL29P47914 159 aaKnown RBP15.75■□□□□ 0.11
SDCBP-204ENST00000447182 TNFSF10P50591 281 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 ZNF134P52741 427 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 PAFAH1B2P68402 229 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 ARSJQ5FYB0 599 aaPredicted RBP15.75■□□□□ 0.11
SDCBP-204ENST00000447182 CNEP1R1Q8N9A8 125 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 CMTM2Q8TAZ6 248 aa15.75■□□□□ 0.11
SDCBP-204ENST00000447182 ZCCHC14Q8WYQ9 949 aaKnown RBP15.75■□□□□ 0.11
SDCBP-204ENST00000447182 TRGV10A0A0A0MS01 117 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 CFHR2P36980 270 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 ATP1A1-AS1Q5TC04 95 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 TMPRSS7Q7RTY8 843 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 STPG3Q8N7X2 389 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 OR4S2Q8NH73 311 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 SSMEM1Q8WWF3 244 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 PLPPR2Q96GM1 343 aa15.74■□□□□ 0.11
SDCBP-204ENST00000447182 SNHG12Q9BXW3 62 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms