RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
HDAC4-204ENST00000446876 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
HDAC4-204ENST00000446876 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
HDAC4-204ENST00000446876 TRAV3A0A0B4J244 114 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 HMX3A6NHT5 357 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 E7EUB6 86 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 MPPED1O15442 326 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 RBFOX2O43251 390 aaKnown RBP eCLIP11.49□□□□□ -0.575e-6■■□□□ 12
HDAC4-204ENST00000446876 ACTL6BO94805 426 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 HRASP01112 189 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 FHL3Q13643 280 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 FOXB2Q5VYV0 432 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 FAAP20Q6NZ36 180 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 C15orf40Q8WUR7 153 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 SMIM4Q8WVI0 70 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 BORCS5Q969J3 196 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 NXF2Q9GZY0 626 aaKnown RBP11.49□□□□□ -0.57
HDAC4-204ENST00000446876 COA4Q9NYJ1 87 aa11.49□□□□□ -0.57
HDAC4-204ENST00000446876 RSL24D1Q9UHA3 163 aaKnown RBP11.49□□□□□ -0.57
HDAC4-204ENST00000446876 IGHV4OR15-8A0A075B7B6 117 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 A0A087WW49 117 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 A0A1B0GW64 132 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 CREBL2O60519 120 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 RBMXL2O75526 392 aaKnown RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 HPRT1P00492 218 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 PRH1P02810 166 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 IFNA6P05013 189 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 CD40LGP29965 261 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 HOXD3P31249 432 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 TNFSF8P32971 234 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 PPP5CP53041 499 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 TAS2R31P59538 309 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 RUNX1Q01196 453 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 PDLIM3Q53GG5 364 aaPredicted RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 CMTM1Q8IZ96 169 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 TMEM229BQ8NBD8 167 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 DGCR14Q96DF8 476 aaKnown RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 FYTTD1Q96QD9 318 aaKnown RBP11.48□□□□□ -0.57
HDAC4-204ENST00000446876 SLA2Q9H6Q3 261 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 HRASLSQ9HDD0 168 aa11.48□□□□□ -0.57
HDAC4-204ENST00000446876 PRKDCP78527 4128 aaKnown RBP11.47□□□□□ -0.57
HDAC4-204ENST00000446876 TEX22C9J3V5 150 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 RAB3DO95716 219 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 CD74P04233 296 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
HDAC4-204ENST00000446876 PGAM2P15259 253 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 NQO2P16083 231 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 PI3P19957 117 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 TBPP20226 339 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 F2RP25116 425 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 LPAR6P43657 344 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 RPL27AP46776 148 aaKnown RBP11.47□□□□□ -0.57
HDAC4-204ENST00000446876 SLURP1P55000 103 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 TAS2R19P59542 299 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 MRPS10P82664 201 aaKnown RBP11.47□□□□□ -0.57
HDAC4-204ENST00000446876 ZNF616Q08AN1 781 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 STEAP1BQ6NZ63 245 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 TBC1D26Q86UD7 250 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 LHFPL1Q86WI0 220 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 SLC38A6Q8IZM9 456 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 ADAD2Q8NCV1 583 aaKnown RBP11.47□□□□□ -0.57
HDAC4-204ENST00000446876 DMBX1Q8NFW5 382 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 TMEM68Q96MH6 324 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 PLEKHA2Q9HB19 425 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 TMEM140Q9NV12 185 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 BET1LQ9NYM9 111 aa11.47□□□□□ -0.57
HDAC4-204ENST00000446876 H3BUA1 57 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 CTDSPLO15194 276 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 OR9G9P0C7N8 305 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 HLA-GP17693 338 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 UCP3P55916 312 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 KRTAP10-11P60412 298 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 RPL8P62917 257 aaKnown RBP11.46□□□□□ -0.57
HDAC4-204ENST00000446876 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 SCGB2B2Q4G0G5 96 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 LPCAT3Q6P1A2 487 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 ARRDC1Q8N5I2 433 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 CD300LFQ8TDQ1 290 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 DPF1Q92782 380 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 SPIN2AQ99865 258 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 SLC2A9Q9NRM0 540 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-204ENST00000446876 COMMD9Q9P000 198 aa11.46□□□□□ -0.57
HDAC4-204ENST00000446876 C13orf42A0A1B0GVH6 325 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 FABP12A6NFH5 140 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 CGB1A6NKQ9 187 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 LINC01619G3V211 115 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 UPK2O00526 184 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 DUS4LO95620 317 aaKnown RBP11.45□□□□□ -0.58
HDAC4-204ENST00000446876 OR8U8P0C7N1 319 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 ZNF735P0CB33 412 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 AREGP15514 252 aa11.45□□□□□ -0.58
HDAC4-204ENST00000446876 MAS1LP35410 378 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms