RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ASCL2Q99929 193 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 AIFM2Q9BRQ8 373 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 TINAGL1Q9GZM7 467 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-203ENST00000444440 CCL28Q9NRJ3 127 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 EHFQ9NZC4 300 aa8.33□□□□□ -1.08
SF3A1-203ENST00000444440 H3BUA1 57 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 RGS5O15539 181 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 TNFSF12O43508 249 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 CREBL2O60519 120 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-203ENST00000444440 LY86O95711 162 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 PMP2P02689 132 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 RFX2P48378 723 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 INSL3P51460 131 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 FXYD4P59646 89 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 TSPAN5P62079 268 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 CATR1Q13166 79 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 LPCAT3Q6P1A2 487 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 IL34Q6ZMJ4 242 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 ZNF429Q86V71 674 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 PUSL1Q8N0Z8 303 aaKnown RBP8.32□□□□□ -1.08
SF3A1-203ENST00000444440 OR6F1Q8NGZ6 308 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 OR4S2Q8NH73 311 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 TCTEX1D2Q8WW35 142 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 TMEM68Q96MH6 324 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 COA4Q9NYJ1 87 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 TAS2R8Q9NYW2 309 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 RABL2AQ9UBK7 228 aaPredicted RBP8.32□□□□□ -1.08
SF3A1-203ENST00000444440 ANAPC10Q9UM13 185 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 RABL2BQ9UNT1 228 aa8.32□□□□□ -1.08
SF3A1-203ENST00000444440 C13orf42A0A1B0GVH6 325 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 HMX3A6NHT5 357 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 CGB1A6NKQ9 187 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 TEX22C9J3V5 150 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 ACTL6BO94805 426 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 BRI3O95415 125 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 HRASP01112 189 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 OR9G9P0C7N8 305 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 S100GP29377 79 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 RCVRNP35243 200 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 SPCS2Q15005 226 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 LYSMD2Q8IV50 215 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 VSTM2AQ8TAG5 236 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 CD300LFQ8TDQ1 290 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 FCAMRQ8WWV6 532 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 PHB2Q99623 299 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 ZNF2Q9BSG1 426 aaPredicted RBP8.31□□□□□ -1.08
SF3A1-203ENST00000444440 AKIP1Q9NQ31 210 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 EXTL2Q9UBQ6 330 aa8.31□□□□□ -1.08
SF3A1-203ENST00000444440 CSMD3Q7Z407 3707 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 TRBV9A0A0B4J1U6 114 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 KBTBD11O94819 623 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 IFNA6P05013 189 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 IL6RP08887 468 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-203ENST00000444440 GP9P14770 177 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 HLA-DMAP28067 261 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 HRH1P35367 487 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 SYNJ2BPP57105 145 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 RHOGP84095 191 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 KLF5Q13887 457 aaPredicted RBP8.3□□□□□ -1.08
SF3A1-203ENST00000444440 ZNF818PQ6ZRF7 136 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 SSX9Q7RTT3 188 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 TMEM17Q86X19 198 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 MMD2Q8IY49 270 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 CMTM1Q8IZ96 169 aa8.3□□□□□ -1.08
SF3A1-203ENST00000444440 CCDC59Q9P031 241 aaKnown RBP8.3□□□□□ -1.08
SF3A1-203ENST00000444440 ZMAT5Q9UDW3 170 aaKnown RBP8.3□□□□□ -1.08
SF3A1-203ENST00000444440 TRAV3A0A0B4J244 114 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 BMPR1BO00238 502 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 OR2A4O95047 310 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 IGLV1-51P01701 117 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 AREGP15514 252 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 EDN2P20800 178 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 MRPS10P82664 201 aaKnown RBP8.29□□□□□ -1.08
SF3A1-203ENST00000444440 ADAMTSL5Q6ZMM2 481 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 SPAG16Q8N0X2 631 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 TTC9CQ8N5M4 171 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 TMEM167AQ8TBQ9 72 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 DYNC2LI1Q8TCX1 351 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 MOB3AQ96BX8 217 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 ISOC1Q96CN7 298 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 DIRAS2Q96HU8 199 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 OR2A7Q96R45 310 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 FXYD6Q9H0Q3 95 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 RANGRFQ9HD47 186 aaPredicted RBP8.29□□□□□ -1.08
SF3A1-203ENST00000444440 PEF1Q9UBV8 284 aaKnown RBP8.29□□□□□ -1.08
SF3A1-203ENST00000444440 DMRT1Q9Y5R6 373 aa8.29□□□□□ -1.08
SF3A1-203ENST00000444440 A0A0G2JLM5 398 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 IZUMO1RA6ND01 250 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 CCDC160A6NGH7 325 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 H3BMQ9 156 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 GPR31O00270 319 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 CTDSP2O14595 271 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 MPPED1O15442 326 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 RBFOX2O43251 390 aaKnown RBP eCLIP8.28□□□□□ -1.08
SF3A1-203ENST00000444440 OR2J3O76001 311 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 HPRT1P00492 218 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 CSN3P07498 182 aa8.28□□□□□ -1.08
SF3A1-203ENST00000444440 ZNF735P0CB33 412 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms