RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 TINAGL1Q9GZM7 467 aaPredicted RBP12.97□□□□□ -0.33
TSPAN9-204ENST00000444315 NAA50Q9GZZ1 169 aaKnown RBP12.97□□□□□ -0.33
TSPAN9-204ENST00000444315 RGS5O15539 181 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 GABARAPO95166 117 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 IGLV2-14P01704 120 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 RLN1P04808 185 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 ELK1P19419 428 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 HRH1P35367 487 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 MSMO1Q15800 293 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 TATDN3Q17R31 274 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 ASPHD1Q5U4P2 390 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 ZNF818PQ6ZRF7 136 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 USMG5Q96IX5 58 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 CMTM3Q96MX0 182 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 SCPEP1Q9HB40 452 aa12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 ZNF256Q9Y2P7 627 aaPredicted RBP12.96□□□□□ -0.33
TSPAN9-204ENST00000444315 DHFRP00374 187 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 PRH1P02810 166 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 IFNA6P05013 189 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 DEFA4P12838 97 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 ZNF182P17025 639 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 RCVRNP35243 200 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 MAS1LP35410 378 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 RPL8P62917 257 aaKnown RBP12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 RHOGP84095 191 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 ATP5G2Q06055 141 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 DYRK1AQ13627 763 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 CLVS1Q8IUQ0 354 aaPredicted RBP12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 OR6Q1Q8NGQ2 317 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 CD300LFQ8TDQ1 290 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 EXTL2Q9UBQ6 330 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 ADAM30Q9UKF2 790 aa12.95□□□□□ -0.34
TSPAN9-204ENST00000444315 HMX3A6NHT5 357 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 HPRT1P00492 218 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 RPA2P15927 270 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 NQO2P16083 231 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 EXOSC2Q13868 293 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 MOB3AQ96BX8 217 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 COMMD5Q9GZQ3 224 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 DNAH3Q8TD57 4116 aa12.94□□□□□ -0.34
TSPAN9-204ENST00000444315 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 PGAM2P15259 253 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 HLA-GP17693 338 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 TAS2R31P59538 309 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 PHLDA2Q53GA4 152 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 OR4A47Q6IF82 309 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 LPCAT3Q6P1A2 487 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 ADAD2Q8NCV1 583 aaKnown RBP12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 OR4A5Q8NH83 315 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
TSPAN9-204ENST00000444315 GPR31O00270 319 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 OR2J3O76001 311 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 S1PR2O95136 353 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 EIF4EBP1Q13541 118 aaPredicted RBP12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 CTF1Q16619 201 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 PUSL1Q8N0Z8 303 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 GPX8Q8TED1 209 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 HINT2Q9BX68 163 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 FXYD6Q9H0Q3 95 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 AKIP1Q9NQ31 210 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 SCOCQ9UIL1 159 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 ZNF257Q9Y2Q1 563 aa12.92□□□□□ -0.34
TSPAN9-204ENST00000444315 TNCP24821 2201 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 CYB5BO43169 146 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 REG1AP05451 166 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 GNRHRP30968 328 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 RNASE10Q5GAN6 216 aaKnown RBP12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 DHRS11Q6UWP2 260 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 TMEM140Q9NV12 185 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 BET1LQ9NYM9 111 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 COMMD9Q9P000 198 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 ANAPC10Q9UM13 185 aa12.91□□□□□ -0.34
TSPAN9-204ENST00000444315 M0QYG6 137 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 SNAPC5O75971 98 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 NAT1P18440 290 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 LPAR6P43657 344 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 MRGPRG-AS1Q2M3A8 158 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 C15orf32Q32M92 178 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 ACSM6Q6P461 480 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 TTC9CQ8N5M4 171 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 NECAP1Q8NC96 275 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 RAB2BQ8WUD1 216 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 FCAMRQ8WWV6 532 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 PLEKHA2Q9HB19 425 aa12.9□□□□□ -0.34
TSPAN9-204ENST00000444315 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
TSPAN9-204ENST00000444315 PGLYRP1O75594 196 aaPredicted RBP12.89□□□□□ -0.35
TSPAN9-204ENST00000444315 MYOD1P15172 320 aa12.89□□□□□ -0.35
TSPAN9-204ENST00000444315 SPNP16150 400 aa12.89□□□□□ -0.35
TSPAN9-204ENST00000444315 F2RP25116 425 aa12.89□□□□□ -0.35
TSPAN9-204ENST00000444315 ZNF343Q6P1L6 599 aa12.89□□□□□ -0.35
TSPAN9-204ENST00000444315 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms