RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CTRB2Q6GPI1 263 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 H1FOOQ8IZA3 346 aaPredicted RBP10.6□□□□□ -0.71
HMGN1-208ENST00000443046 EEF1AKMT3Q96AZ1 226 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 OR51E2Q9H255 320 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 PSORS1C1Q9UIG5 152 aa10.6□□□□□ -0.71
HMGN1-208ENST00000443046 HSPG2P98160 4391 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 IGLV11-55A0A075B6I3 123 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 MYL12BO14950 172 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 S1PR2O95136 353 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 AREGP15514 252 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 FCGR2BP31994 310 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-208ENST00000443046 NANOS2P60321 138 aaKnown RBP10.59□□□□□ -0.71
HMGN1-208ENST00000443046 PUSL1Q8N0Z8 303 aaKnown RBP10.59□□□□□ -0.71
HMGN1-208ENST00000443046 PQLC1Q8N2U9 271 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 OR56B1Q8NGI3 324 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 TMEM167AQ8TBQ9 72 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 GALNT14Q96FL9 552 aa10.59□□□□□ -0.71
HMGN1-208ENST00000443046 ZNF436Q9C0F3 470 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-208ENST00000443046 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
HMGN1-208ENST00000443046 MFSD2BA6NFX1 497 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 FCGR3BO75015 233 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 KBTBD11O94819 623 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 HIST1H1BP16401 226 aaKnown RBP10.58□□□□□ -0.72
HMGN1-208ENST00000443046 MAS1LP35410 378 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 RPL27AP46776 148 aaKnown RBP10.58□□□□□ -0.72
HMGN1-208ENST00000443046 ARFRP1Q13795 201 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 LINC00336Q6ZUF6 198 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 C2CD4CQ8TF44 421 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 OR2A7Q96R45 310 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 MFFQ9GZY8 342 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 FKBP14Q9NWM8 211 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 APLNQ9ULZ1 77 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
HMGN1-208ENST00000443046 RBM7Q9Y580 266 aaKnown RBP10.58□□□□□ -0.72
HMGN1-208ENST00000443046 DPPA5A6NC42 116 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 CGB1A6NKQ9 187 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 DHFRP00374 187 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 IGLV2-14P01704 120 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 MYOD1P15172 320 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 RPL35AP18077 110 aaKnown RBP10.57□□□□□ -0.72
HMGN1-208ENST00000443046 BRWD1-AS2P59051 145 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 RPL30P62888 115 aaKnown RBP10.57□□□□□ -0.72
HMGN1-208ENST00000443046 PLA2G7Q13093 441 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 IRF3Q14653 427 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 RBMS2Q15434 407 aaKnown RBP10.57□□□□□ -0.72
HMGN1-208ENST00000443046 C2orf76Q3KRA6 126 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 Q6ZS49 121 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 ZNF502Q8TBZ5 544 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 MAFIPQ8WZ33 124 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 CXorf58Q96LI9 332 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 PLGRKTQ9HBL7 147 aa10.57□□□□□ -0.72
HMGN1-208ENST00000443046 IGKV1D-8A0A087WSZ0 117 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 IFNA4P05014 189 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-208ENST00000443046 RAB11BQ15907 218 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 AHSA2Q719I0 299 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 C10orf67Q8IYJ2 551 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 GVQW1Q8N7I0 195 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 VSTM2AQ8TAG5 236 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 CYGBQ8WWM9 190 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 TMEM190Q8WZ59 177 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 FAM3DQ96BQ1 224 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 GINS4Q9BRT9 223 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 DCUN1D5Q9BTE7 237 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 LSM2Q9Y333 95 aaKnown RBP10.56□□□□□ -0.72
HMGN1-208ENST00000443046 PRELID3BQ9Y3B1 194 aa10.56□□□□□ -0.72
HMGN1-208ENST00000443046 DENRO43583 198 aaKnown RBP10.55□□□□□ -0.72
HMGN1-208ENST00000443046 CLDN12P56749 244 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 MRPS15P82914 257 aaKnown RBP10.55□□□□□ -0.72
HMGN1-208ENST00000443046 SSX1Q16384 188 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 TMEM91Q6ZNR0 172 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 KCTD9Q7L273 389 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 RAB3CQ96E17 227 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 RARRES2Q99969 163 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 CENPOQ9BU64 300 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 CSTL1Q9H114 145 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
HMGN1-208ENST00000443046 RBMX2Q9Y388 322 aaKnown RBP10.55□□□□□ -0.72
HMGN1-208ENST00000443046 AK6Q9Y3D8 172 aaKnown RBP10.55□□□□□ -0.72
HMGN1-208ENST00000443046 IGHV3-35A0A0C4DH35 117 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 TMEM272A0A1B0GTI8 110 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 MFNGO00587 321 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.72
HMGN1-208ENST00000443046 GPR183P32249 361 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 MED22Q15528 200 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 LAMTOR1Q6IAA8 161 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
HMGN1-208ENST00000443046 RAB22AQ9UL26 194 aa10.54□□□□□ -0.72
HMGN1-208ENST00000443046 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
HMGN1-208ENST00000443046 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 MPTX1A8MV57 137 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 RAB27BO00194 218 aa10.53□□□□□ -0.72
HMGN1-208ENST00000443046 TGOLN2O43493 480 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms